Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Seurat update #5339

Merged
merged 17 commits into from
Jul 7, 2023
Merged

Seurat update #5339

merged 17 commits into from
Jul 7, 2023

Commits on Apr 18, 2023

  1. update

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed Apr 18, 2023
    Configuration menu
    Copy the full SHA
    c416143 View commit details
    Browse the repository at this point in the history

Commits on May 25, 2023

  1. add cite seq, still testing, but main functions done

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed May 25, 2023
    Configuration menu
    Copy the full SHA
    5853a9f View commit details
    Browse the repository at this point in the history

Commits on May 26, 2023

  1. update

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed May 26, 2023
    Configuration menu
    Copy the full SHA
    1cfa37f View commit details
    Browse the repository at this point in the history

Commits on May 31, 2023

  1. fix output names

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed May 31, 2023
    Configuration menu
    Copy the full SHA
    087033f View commit details
    Browse the repository at this point in the history

  2. remove empty line 

    remove one empty line
    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed May 31, 2023
    Configuration menu
    Copy the full SHA
    fc18f6b View commit details
    Browse the repository at this point in the history

  3. remove too-large test data and just check output size and number

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed May 31, 2023
    Configuration menu
    Copy the full SHA
    526e442 View commit details
    Browse the repository at this point in the history

Commits on Jun 9, 2023

  1. bump, will do tests next

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed Jun 9, 2023
    Configuration menu
    Copy the full SHA
    f062ad9 View commit details
    Browse the repository at this point in the history

Commits on Jun 25, 2023

  1. add CITE-Seq test

    @pavanvidem
    pavanvidem committed Jun 25, 2023
    Configuration menu
    Copy the full SHA
    1fcbec5 View commit details
    Browse the repository at this point in the history

Commits on Jun 27, 2023

  1. fix feat_comp and increase test data

    @pavanvidem
    pavanvidem committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    47f517a View commit details
    Browse the repository at this point in the history

  2. deduplicate the code

    @pavanvidem
    pavanvidem committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    6bf82c1 View commit details
    Browse the repository at this point in the history

  3. Merge pull request #3 from pavanvidem/astrovsky01_seurat_update 

    add CITE-Seq test
    @astrovsky01
    astrovsky01 committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    b90b528 View commit details
    Browse the repository at this point in the history

  4. fix linting and tests

    @pavanvidem
    pavanvidem committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    f28edc7 View commit details
    Browse the repository at this point in the history

  5. Merge pull request #4 from pavanvidem/astrovsky01_seurat_update 

    fix linting and tests
    @astrovsky01
    astrovsky01 committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    0a8ecca View commit details
    Browse the repository at this point in the history

  6. add help text

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    fdc076c View commit details
    Browse the repository at this point in the history

  7. Update tools/seurat/macros.xml 

    Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
    @astrovsky01 @nsoranzo
    astrovsky01 and nsoranzo committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    c4d988b View commit details
    Browse the repository at this point in the history

  8. Update tools/seurat/macros.xml 

    Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
    @astrovsky01 @nsoranzo
    astrovsky01 and nsoranzo committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    78cf31c View commit details
    Browse the repository at this point in the history

  9. add test to cover all cite-seq outputs

    Alexander OSTROVSKY authored and Alexander OSTROVSKY committed Jun 27, 2023
    Configuration menu
    Copy the full SHA
    3fe1f25 View commit details
    Browse the repository at this point in the history