start cleaning up label metadata for geneontology/noctua#801

geneontology · Nov 18, 2022 · dc4dbf7 · dc4dbf7
1 parent 9eff5ea
commit dc4dbf7
Show file tree

Hide file tree

Showing 2 changed files with 10 additions and 8 deletions.
diff --git a/conf/context.yaml b/conf/context.yaml
@@ -2,7 +2,9 @@
 #### Colors are X11: http://cng.seas.rochester.edu/CNG/docs/x11color.html
 #### For now, "manually" export into context.js.tmpl using:
 ####  [C-u M-!]
-####  /home/sjcarbon/local/src/git/amigo/node_modules/.bin/yaml2json /home/sjcarbon/local/src/git/amigo/conf/context.yaml --p
+####  /home/sjcarbon/local/src/git/amigo/node_modules/.bin/yaml2json /home/sjcarbon/local/src/git/amigo/conf/context.yaml --p > /tmp/foo.json
+####  Inject manually into:
+####  amigo/javascript/npm/amigo2-instance-data/generation-templates/context.js.tmpl
 ####
 'instance_of':
   readable: 'instance of'
@@ -221,7 +223,7 @@ activates:
   # green
   color: '#008000'
 'RO:0002407':
-  readable: 'indirectly activates'
+  readable: 'indirectly positively regulates'
   priority: 1
   aliases:
     - 'http://purl.obolibrary.org/obo/indirectly_activates'
@@ -253,7 +255,7 @@ upstream_of:
   # red
   color: '#FF0000'
 'RO:0002409':
-  readable: 'indirectly inhibits'
+  readable: 'indirectly negatively regulates'
   priority: 1
   aliases:
     - 'http://purl.obolibrary.org/obo/indirectly_inhibits'

diff --git a/javascript/npm/amigo2-instance-data/generation-templates/context.js.tmpl b/javascript/npm/amigo2-instance-data/generation-templates/context.js.tmpl
@@ -1,15 +1,15 @@
 /*
  * Package: context.js
- * 
+ *
  * Namespace: amigo.data.context
- * 
+ *
  * Another context.
  */
 
 
 /*
  * Variable: context
- * 
+ *
  * Manually added in from conf/context.yaml.
  */
 var data_context = {
@@ -249,7 +249,7 @@ var data_context = {
     "color": "#008000"
   },
   "RO:0002407": {
-    "readable": "indirectly activates",
+    "readable": "indirectly positively regulates",
     "priority": 1,
     "aliases": [
       "http://purl.obolibrary.org/obo/indirectly_activates",
@@ -284,7 +284,7 @@ var data_context = {
     "color": "#FF0000"
   },
   "RO:0002409": {
-    "readable": "indirectly inhibits",
+    "readable": "indirectly negatively regulates",
     "priority": 1,
     "aliases": [
       "http://purl.obolibrary.org/obo/indirectly_inhibits",