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Review annotations to GO:1901564 organonitrogen compound metabolic process; GO:1901566 organonitrogen compound biosynthetic process; GO:1901565 organonitrogen compound catabolic process; GO:0010243 response to organonitrogen compound; GO:0010243 cellular response to organonitrogen compound #5300

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ValWood opened this issue Jun 24, 2024 · 5 comments
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annotation review direct_ann_to_list_of_terms Direct annotations to list of GO terms

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@ValWood
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ValWood commented Jun 24, 2024

Dear all,

The proposal has been made to obsolete

GO:1901564 organonitrogen compound metabolic process
GO:1901566 organonitrogen compound biosynthetic process
GO:1901565 organonitrogen compound catabolic process
GO:0010243 response to organonitrogen compound
GO:0010243 cellular response to organonitrogen compound

see geneontology/go-ontology#27194

Experimental annotations that need to be reviewed are here:
https://docs.google.com/spreadsheets/d/1To7vaLVHu2oLD2BrwuGkRQvjLnv4Bqh18IX_VuDVLDE/edit?gid=0#gid=0

Impacted groups:

AgBase 4
MGI 1
TAIR 2
DictyBase 1
UniProt 2

Mappings that need to be reviewed: (InterPro2GO, UniProt-Keywords, UniRule)
NONE

Thanks.

@ValWood ValWood added annotation review direct_ann_to_list_of_terms Direct annotations to list of GO terms labels Jun 24, 2024
@ValWood ValWood changed the title Review annotations to [INSERT GO TERM] Review annotations to GO:1901564 organonitrogen compound metabolic process GO:1901566 organonitrogen compound biosynthetic process GO:1901565 organonitrogen compound catabolic process GO:0010243 response to organonitrogen compound GO:0010243 cellular response to organonitrogen compound Jun 24, 2024
@ValWood ValWood changed the title Review annotations to GO:1901564 organonitrogen compound metabolic process GO:1901566 organonitrogen compound biosynthetic process GO:1901565 organonitrogen compound catabolic process GO:0010243 response to organonitrogen compound GO:0010243 cellular response to organonitrogen compound Review annotations to GO:1901564 organonitrogen compound metabolic process; GO:1901566 organonitrogen compound biosynthetic process; GO:1901565 organonitrogen compound catabolic process; GO:0010243 response to organonitrogen compound; GO:0010243 cellular response to organonitrogen compound Jun 24, 2024
@pfey03
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pfey03 commented Jun 25, 2024

This annotation is from Bob rjdodson I told im in Slack to fix it

@Antonialock
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uniprot done

@Antonialock Antonialock removed their assignment Jun 25, 2024
@pgaudet pgaudet assigned rjdodson and unassigned pfey03 Jun 25, 2024
@LiNiMGI
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LiNiMGI commented Jun 25, 2024

MGI done.

@LiNiMGI LiNiMGI removed their assignment Jun 25, 2024
@tberardini
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TAIR done

@tberardini tberardini removed their assignment Jun 26, 2024
@pgaudet
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pgaudet commented Jul 12, 2024

All done

@pgaudet pgaudet closed this as completed Jul 12, 2024
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Labels
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