obsoleted terms fixes #23252

src/ontology/go-edit.obo

@@ -9105,11 +9105,13 @@ consider: GO:0090398
 
 [Term]
 id: GO:0001306
-name: age-dependent response to oxidative stress
+name: obsolete age-dependent response to oxidative stress
 namespace: biological_process
-def: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:jh, PMID:12044938]
-is_a: GO:0006979 ! response to oxidative stress
-relationship: part_of GO:0007571 ! age-dependent general metabolic decline
+def: "OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:jh, PMID:12044938]
+comment: This term was obsoleted because it represents a phenotype.
+property_value: term_tracker_item https://github.com/geneontology/go-ontology/issues/23252 xsd:anyURI
+is_obsolete: true
+consider: GO:0034599
 
 [Term]
 id: GO:0001307
@@ -9205,17 +9207,18 @@ is_obsolete: true
 
 [Term]
 id: GO:0001315
-name: age-dependent response to reactive oxygen species
+name: obsolete age-dependent response to reactive oxygen species
 namespace: biological_process
-def: "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:jh, PMID:12044938]
+def: "OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:jh, PMID:12044938]
+comment: This term was obsoleted because it represents a phenotype.
 synonym: "age-dependent response to active oxygen species" EXACT []
 synonym: "age-dependent response to AOS" EXACT []
 synonym: "age-dependent response to reactive oxidative species" EXACT []
 synonym: "age-dependent response to reactive oxygen intermediate" EXACT []
 synonym: "age-dependent response to ROI" EXACT []
 synonym: "age-dependent response to ROS" EXACT []
-is_a: GO:0000302 ! response to reactive oxygen species
-is_a: GO:0001306 ! age-dependent response to oxidative stress
+is_obsolete: true
+consider: GO:0034599
 
 [Term]
 id: GO:0001316
@@ -73000,15 +73003,16 @@ is_obsolete: true
 
 [Term]
 id: GO:0007571
-name: age-dependent general metabolic decline
+name: obsolete age-dependent general metabolic decline
 namespace: biological_process
-def: "A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis." [GOC:jh, GOC:mah, PMID:9891807]
+def: "OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis." [GOC:jh, GOC:mah, PMID:9891807]
+comment: This term was obsolete because it represents a phenotype.
 synonym: "age-dependent decreased translational activity" NARROW []
 synonym: "age-dependent increased protein content" NARROW []
 synonym: "age-dependent yeast cell size increase" RELATED []
 synonym: "nucleolar size increase" NARROW []
-is_a: GO:0032502 ! developmental process
-relationship: part_of GO:0007568 ! aging
+property_value: term_tracker_item https://github.com/geneontology/go-ontology/issues/23252 xsd:anyURI
+is_obsolete: true
 
 [Term]
 id: GO:0007572
@@ -386837,11 +386841,13 @@ creation_date: 2010-11-11T05:11:24Z
 
 [Term]
 id: GO:0072353
-name: cellular age-dependent response to reactive oxygen species
+name: obsolete cellular age-dependent response to reactive oxygen species
 namespace: biological_process
-def: "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:mah]
-is_a: GO:0001315 ! age-dependent response to reactive oxygen species
-is_a: GO:0034614 ! cellular response to reactive oxygen species
+def: "OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism." [GOC:mah]
+comment: This term was obsoleted because it represents a phenotype.
+property_value: term_tracker_item https://github.com/geneontology/go-ontology/issues/23252 xsd:anyURI
+is_obsolete: true
+consider: GO:0034599
 created_by: mah
 creation_date: 2010-11-12T11:27:27Z