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term genie submissions from PomBase #79

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ValWood opened this issue Nov 19, 2015 · 4 comments
Open

term genie submissions from PomBase #79

ValWood opened this issue Nov 19, 2015 · 4 comments
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@ValWood
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ValWood commented Nov 19, 2015

Hi,

Could you let me know the number of sumission from Antonia, Midori and myself for the PomBase part of the GO grant report?

Thanks

Val

@hdietze
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hdietze commented Nov 23, 2015

I have created the summary statistics for the monthly class changes in the GeneOntology.
The TSV has the following columns:

  • start date
  • end date
  • total number of classes in GO
  • All added classes (includes TermGenie generated ones)
  • Classes add via TermGenie
  • obsoleted classes
  • merged classes
  • Classes added via TermGenie and have a created_by tag for either vw, mah, or al
        total   added   TG Added    obsoleted   merged      Pombase TG added
2014-11-01  2014-12-01  40339   172 134 1   2       32
2014-12-01  2015-01-01  40482   150 112 9   1       24
2015-01-01  2015-02-01  40593   127 109 16  2       33
2015-02-01  2015-03-01  40707   158 130 7   41      21
2015-03-01  2015-04-01  40914   212 197 11  0       8
2015-04-01  2015-05-01  41086   175 97  8   0       5
2015-05-01  2015-06-01  41237   153 109 2   1       6
2015-06-01  2015-07-01  41425   201 171 10  5       5
2015-07-01  2015-08-01  41592   174 132 4   5       15
2015-08-01  2015-09-01  41751   159 143 3   0       16
2015-09-01  2015-10-01  41839   88  70  4   0       16
2015-10-01  2015-11-01  41952   113 92  3   0       4

You should be able to copy and paste the table into Excel and slice and dice as required for the report.

@hdietze hdietze self-assigned this Nov 23, 2015
@ValWood
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ValWood commented Nov 24, 2015

thanks Heiko!

@hdietze
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hdietze commented Dec 15, 2015

Add latest changes

2015-11-01  2015-12-01  42040   95  76  13  0       21
2015-12-01  2015-12-14  42066   26  25  0   0       4

@ValWood
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ValWood commented Dec 15, 2015

thanks!

On 15/12/2015 17:36, hdietze wrote:

Add latest changes

|2015-11-01 2015-12-01 42040 95 76 13 0 21 2015-12-01 2015-12-14 42066
26 25 0 0 4 |


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#79 (comment).

Cambridge University
PomBase http://www.pombase.org/
Cambridge Systems Biology Centre http://www.sysbiol.cam.ac.uk/Investigators/val-wood

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