Genouest BioInformatics Platform

Some Tripal UI modifications for BIPAA and friends

Account manager for core facility

micro service to manage biomaj client requests and bank updates

Core library used by biomaj components

Galaxy tools developed by the GenOuest core facility

Docker build for BioMAJ

Download microservice for BioMAJ

CLI for BioMAJ

BioMAJ

Process microservice for BioMAJ

BioMAJ post processes to manipulate Galaxy tool data tables

Sample community db properties and postprocesses

Horizon plugin for os-vm-expire

Web interface for Biomaj management

Openstack VM expiration service

Blast web interface based on symfony2

Logol is a biological pattern matching tool against DNA or protein sequences. It matches a grammar written in LOGOL language againts one or several sequences to find patterns.

FTP server to access BioMAJ banks repository

An IUC-like repo for training

Conda repository for training

Prometheus exporter for openstack core services

openstack client plugin for os-vm-expire

cron management service for BioMAJ

Web proxy to biomaj micro services

Hadoopizer is a generic tool for the parallelisation of bioinformatics analysis in the cloud using the MapReduce paradigm.

Biomaj service to watch remote banks release and send prometheus stats

User management library and service for BioMAJ

This bundle allows you to launch jobs on a cluster from a symfony application.

zipkin integration for BioMAJ to log microservice flow