Pathway Analysis workshop updates 2024

[AlexanderPico]

• Add column to comparison table for number of libraries
• Add DAVID to list (moved MSigDB to "database-specific" bullet point since we describe it in terms of a data source more than the actual tool)
• Test webtools and document bugs before next workshop (e.g., WPIDs that fail to view in webgestalt and IEA)

[khanspers]

• Add single-cell RNA seq example as input data type (marker list / cell-type specific DEGs)
• Add to Interactive Enrichment Analysis demo: supported input list types (see help), can add gmt files from Enrichr (as custom database?) -> added here https://cytoscape.org/cytoscape-tutorials/protocols/functional-enrichment-analysis/#/iea_dataset1
• For slide 6: Add more explanation of the data visualization part (what the colors are, how it was made etc), and maybe also volcano plot. -> in notes
• Point to tutorials for basic pathway data viz in Cytoscape (https://cytoscape.org/cytoscape-tutorials/protocols/wikipathways-app/#/title and https://cytoscape.org/cytoscape-tutorials/protocols/basic-data-visualization/#/) -> added here https://docs.google.com/presentation/d/1Qheb-TiSAXh0P1Wsu-3GYi-TY_5ubTJmlAWEAipgWig/edit#slide=id.g2cab7cd498e_0_1
• IDEA: Create an FAQ document or resource somewhere (maybe on the workshop site?). We can start with the ones we already have, and add to it from the questions we get from every workshop. Then point to it from slides. -> Updated existing list of Key questions and topics in the slide show, but did not add link to wiki.