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equal area penalty slower than expected #598
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Priority: Medium
Business as usual
Status: Needs Profiling
Type: Bug
Minor issues, non-crashing bug, slowdowns
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jsnel
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Mar 15, 2021
Remove check if any area_index is close to all element in global_axis result which generated a lot of extra checks resulting in a massive slowdown. Fixes glotaran#598
jsnel
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Mar 18, 2021
Remove check if any area_index is close to all element in global_axis result which generated a lot of extra checks resulting in a massive slowdown. Fixes glotaran#598
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jsnel
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Mar 28, 2021
* Remove unneeded check in spectral_penalties._get_area Fixes glotaran#598 * Add python 3.9 support (glotaran#450) * Bump numba dependencies as needed for Python 3.9
jsnel
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Mar 28, 2021
* Remove unneeded check in spectral_penalties._get_area Fixes glotaran#598
jsnel
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Mar 28, 2021
* Prepare v0.3.3 release (#603) Bumped version and added release notes * Maintenance/patches for v0.3.3 (#599) 1/2 * Remove unneeded check in spectral_penalties._get_area Fixes #598 * Maintenance/patches for v0.3.3 (#599) 2/2 * Force recalculation of SVD attributes in scheme._prepare_data Fixes #597 * 🔨 Remove no-op code related to new_dims Changes that were lost because code was moved from scheme.py to problem.py * Add a Zenodo config file Added config file based on the example generated by zenodo JSON Export example found at: https://zenodo.org/account/settings/github/repository/glotaran/pyglotaran# Closes #579 * Update readme Clarified Python version support
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Labels
Priority: Medium
Business as usual
Status: Needs Profiling
Type: Bug
Minor issues, non-crashing bug, slowdowns
Description
Use of equal area spectral penalty is much slower than expected.
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