added all files

API.json

@@ -0,0 +1,72 @@
+{
+
+    "record.goal": {
+        "endpoint": "recorder.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/            
+            "goal": "", /*name of goal*/
+            "pageview_xid": 0, /*unique random ID of pageview*/
+            "value": 0 /*relative value of goal*/
+        },
+    },
+
+    "record.pageview": {
+        "endpoint": "recorder.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/            
+            "pageview_xid": 0, /*unique random ID of pageview*/
+            "genome": "", /*gene variants expressed for this pageview*/
+        },
+        "options": {
+            "referrer": "", /*query encoded string containing variety of referrer info*/
+            "vary_call": "", /*type of stuff genetify was asked to vary*/ 
+            "load_time": 0, /*time it took to parse genetify.js*/
+            "init_time": 0, /*time it took to initialize genetify.js*/
+            "results_time": 0, /*time it took to get the results from the server*/
+            "idle_time": 0, /*time between when the results were received and genetify.vary was called*/
+            "vary_time": 0 /*time it took to vary the page*/
+        }
+    },
+
+    "_requestResults": {
+        "endpoint": "reader.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/            
+            "callback": "", /*name of callback function*/
+        },
+        "returns": {} /*returns a dict of dict of variant probabilities*/
+    },
+
+    "record.error": {
+        "endpoint": "recorder.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/            
+            "error": "", /*error message*/
+        },
+        "options": {
+            "line_number": 0 /*line number of javascript error*/
+        }
+    },
+
+    "record.reset": {
+        "endpoint": "delete.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/
+            "delete": true
+        },
+    },
+
+    "test.viewGraphs": {
+        "endpoint": "graphs.php",
+        "params": {
+            "domain": "", /*document.domain*/
+            "page": "", /*genetify.config.NAMESPACE*/            
+        },
+    },
+
+}

TODO

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+test without firebug
+
+Rewrite demo not to use graph.py
+
+Set up live reference implementation
+
+Write tutorial with screenshots
+
+get graphs.php working
+  Update pygooglechart
+
+Factor out algorithm
+
+Spec reporting API?
+Spec visitor info API?
+
+Decide on packer
+Write note about PostGres

benchmark.sh

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+ab -n10 "http://localhost.com/genetify/recorder.php?domain=localhost.com&page=%2Fgenetify%2F&pageview_xid=$RANDOM&genome=mygene%3D__original__%2Cmyothergene%3DC&referrer=&return=text"

deploy.sh

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+# TODO: use git instead of svn
+
+# svn co http://genetify.com/svn/genetify ./
+svn revert *
+svn up                      
+
+# cat genetify.js | python jsmin.py > temp.js
+# mv temp.js genetify.js
+
+cd packer
+perl jsPacker.pl -e62 -f -i ../genetify.js -o ../genetify.js
+cd ..