pybio: basic genomics toolset
- automatized download of genome assemblies from Ensembl and STAR indexing,
- automatized download of genome annotations from Ensembl GTF with fast-searching capabilities,
- Fasta, Fastq, bedGraph and other file format handling,
- motif sequence searches,
- alternative polyadenylation site-pair classification (same-exon, skipped-exon, composite-exon),
- and other.
Use the issues page to report issues and leave suggestions.