SqueakOut: Autoencoder-based segmentation of mouse ultrasonic vocalizations

• Paper @ bioRxiv
• USV segmentation dataset @ OSF

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See segmentation.ipynb to get started on generating segmentations of your spectrograms.

See training.ipynb to get started on training SqueakOut on a custom dataset.

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BibTex citation

@article{Santana2024SqueakOut,
  title={SqueakOut: Autoencoder-based segmentation of mouse ultrasonic vocalizations},
  author={Gustavo M. Santana and Marcelo O. Dietrich},
  journal={bioRxiv},
  year={2024},
  doi={https://doi.org/10.1101/2024.04.19.590368},
  url={https://www.biorxiv.org/content/10.1101/2024.04.19.590368v1}
}