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Improve error message when bgen.idx does not exist #2412

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merged 2 commits into from
Nov 12, 2017

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danking
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@danking danking commented Nov 10, 2017

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private val fs = try {
hConf.fileSystem(indexFileName).open(new Path(indexFileName))
} catch {
case e: Exception => fatal("Could not find a BGEN .idx file at $indexFileName. Try running HailContext.index_begn().", e)
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typo begn

@danking danking dismissed tpoterba’s stale review November 10, 2017 21:08

@tpotbera addressed

@tpoterba tpoterba merged commit b06890c into hail-is:master Nov 12, 2017
jackgoldsmith4 pushed a commit to jackgoldsmith4/hail that referenced this pull request Jun 25, 2018
* Improve error message when bgen.idx does not exist

* Update IndexBTree.scala
@danking danking deleted the import-bgen-error-message branch December 18, 2019 19:47
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2 participants