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SKBR3 PacBio Sequencing #38

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hammer opened this issue Sep 7, 2016 · 1 comment

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somatic dataset

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hammer commented Sep 7, 2016

http://schatzlab.cshl.edu/data/skbr3/

hammer added the somatic dataset label

Contributor

arahuja commented Sep 7, 2016

The BAM and fastq are available on our cluster at /datasets/skbr3

hadoop fs -ls /datasets/skbr3
Found 2 items
-rw-r--r--   3 ahujaa01 supergroup 300049300600 2015-03-31 14:20 /datasets/skbr3/SKBR3_Feb17_GRCh38.sorted.bam
-rw-r--r--   3 ahujaa01 supergroup 210050964666 2015-03-31 14:39 /datasets/skbr3/skbr3.pacbio.fastq.gz

Do we know of validated variants for this set? Is there a particular reason for including a PacBio set?

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