Skip to content

Issues: haowulab/DSS

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

32 Open 14 Closed
32 Open 14 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

unbalanced number of replicates
#46 opened Sep 13, 2024 by LandiMi2
DSS package cannot be installed with Bioconductor 3.18
#43 opened Dec 11, 2023 by carriefa05
1
Error information from makeBSseqData function
#42 opened Dec 7, 2023 by DengEr-1993
2
Question about paired experimental design with correction plus testing interaction effect?
#41 opened Nov 3, 2023 by KristenKrolick
16
Question about using callDMR or callDML for paired design?
#40 opened Nov 3, 2023 by KristenKrolick
Filter on WGMS poorly covered regions
#39 opened Jul 27, 2023 by SaraValsoni
diff.Methy in callDMR
#37 opened Jun 15, 2023 by BeatrizFaustino
3
coverage, prior (-3,1)
#36 opened May 10, 2023 by BeatrizFaustino
1
Confusing DMLtest outputs with smoothing
#35 opened Apr 3, 2023 by weishwu
Adding coeficient names to the fit$beta columns
#34 opened Jan 23, 2023 by llrs
question about constructing hypothesis test
#33 opened Jan 4, 2023 by shuaichenli
Gene annotation problem
#29 opened Nov 26, 2022 by yy549159265
2
Gene set enrichment analysis
#25 opened Oct 7, 2022 by malonzm1
1
Using 200 cores does not change much than 100 cores.
#23 opened Jun 8, 2022 by realzhang
11
An error when running DMLtest
#22 opened Jun 5, 2022 by hengxing12
3
Some confusions about DSS
#21 opened Jan 17, 2022 by nedevil
2
"NA"s in dmltest output
#20 opened Jan 14, 2022 by milaeri
11
Clarification of groups in DMLtest
#19 opened Nov 8, 2021 by tkanholm
3
How do I do with this error
#18 opened Sep 7, 2021 by realzhang
3
DSS DMLtest with smoothing not consistent between DSS versions.
#16 opened Dec 17, 2020 by Christian-Heyer
2
creation of conda environment fails on Ubuntu 18.04.5 LTS
#15 opened Nov 20, 2020 by ViHammer
3
Error in rowVars(p) : could not find function "rowVars"
#14 opened Oct 26, 2020 by alexw-gsct
6
Error when performing statistical test for DML with smoothing
#13 opened Jul 14, 2020 by xiuru
9
return beta-binomial dispersion from DMLfit.multiFactor
#12 opened Jul 4, 2020 by dariomel
7
Suggest adding sorting to makeBSseqData
#11 opened Jun 10, 2020 by Shians
2
ProTip! Adding no:label will show everything without a label.