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Fix UnsupportedOperationException while validating MHD Document Bundle #5925

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Original file line number Diff line number Diff line change
@@ -0,0 +1,5 @@
---
type: fix
issue: 5925
title: "An UnsupportedOperationException occurred when validating R5 MHD bundles using
the HAPI FHIR validator. Thanks to Renaud Subiger for contributing a fix!"
Original file line number Diff line number Diff line change
Expand Up @@ -322,7 +322,8 @@ public ValueSetExpansionOutcome expandVS(
org.hl7.fhir.r5.model.ElementDefinition.ElementDefinitionBindingComponent binding,
boolean cacheOk,
boolean Hierarchical) {
throw new UnsupportedOperationException(Msg.code(663));
ValueSet valueSet = fetchResource(ValueSet.class, binding.getValueSet(), src);
return expandVS(valueSet, cacheOk, Hierarchical);
}

@Override
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Original file line number Diff line number Diff line change
Expand Up @@ -24,6 +24,7 @@
import static org.hamcrest.MatcherAssert.assertThat;
import static org.hamcrest.Matchers.containsString;
import static org.junit.jupiter.api.Assertions.assertArrayEquals;
import static org.junit.jupiter.api.Assertions.assertEquals;

public class NpmPackageValidationSupportTest extends BaseValidationTestWithInlineMocks {

Expand Down Expand Up @@ -89,4 +90,32 @@ public void loadPackageFromClasspath_normally_loadsExpectedBinaries() throws IOE
assertArrayEquals(expectedBytes, actualBytes);
}
}

@Test
public void testValidateIheMhdPackage() throws IOException {
ValidationSupportChain validationSupportChain = new ValidationSupportChain();
validationSupportChain.addValidationSupport(getNpmPackageValidationSupport("classpath:package/ihe.iti.mhd.tgz"));
validationSupportChain.addValidationSupport(new DefaultProfileValidationSupport(myFhirContext));
validationSupportChain.addValidationSupport(new CommonCodeSystemsTerminologyService(myFhirContext));
validationSupportChain.addValidationSupport(new InMemoryTerminologyServerValidationSupport(myFhirContext));
validationSupportChain.addValidationSupport(new SnapshotGeneratingValidationSupport(myFhirContext));

CachingValidationSupport validationSupport = new CachingValidationSupport(validationSupportChain);

FhirValidator validator = myFhirContext.newValidator();
FhirInstanceValidator instanceValidator = new FhirInstanceValidator(validationSupport);
validator.registerValidatorModule(instanceValidator);

String bundle = loadResource("/r4/mhd_minimal_provide_document_bundle.json");
ValidationResult validationResult = validator.validateWithResult(bundle);

assertEquals(1, validationResult.getMessages().size());

String outcomeSerialized = myFhirContext.newJsonParser()
.setPrettyPrint(true)
.encodeResourceToString(validationResult.toOperationOutcome());
ourLog.info(outcomeSerialized);

assertThat(outcomeSerialized, containsString("Terminology_TX_ValueSet_NotFound"));
}
}
Binary file not shown.
Original file line number Diff line number Diff line change
@@ -0,0 +1,190 @@
{
"resourceType": "Bundle",
"meta": {
"profile": [
"https://profiles.ihe.net/ITI/MHD/StructureDefinition/IHE.MHD.Minimal.ProvideBundle"
],
"security": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
"code": "HTEST"
}
]
},
"type": "transaction",
"timestamp": "2024-05-11T14:16:19.224Z",
"entry": [
{
"fullUrl": "urn:uuid:9649cc3d-eb0b-407b-b1ba-61c4eef4dba3",
"resource": {
"resourceType": "List",
"id": "9649cc3d-eb0b-407b-b1ba-61c4eef4dba3",
"meta": {
"profile": [
"https://profiles.ihe.net/ITI/MHD/StructureDefinition/IHE.MHD.Minimal.SubmissionSet"
],
"security": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
"code": "HTEST"
}
]
},
"text": {
"status": "extensions",
"div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">SubmissionSet with Patient</div>"
},
"contained": [
{
"resourceType": "Practitioner",
"id": "622209e6-32ad-4283-b4eb-e2bea2aea856",
"telecom": [
{
"system": "email",
"value": "john.doe@localhost"
}
]
}
],
"extension": [
{
"url": "https://profiles.ihe.net/ITI/MHD/StructureDefinition/ihe-sourceId",
"valueIdentifier": {
"value": "urn:oid:1.2.3.4"
}
},
{
"url": "https://profiles.ihe.net/ITI/MHD/StructureDefinition/ihe-intendedRecipient",
"valueReference": {
"reference": "#622209e6-32ad-4283-b4eb-e2bea2aea856"
}
}
],
"identifier": [
{
"use": "usual",
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:1.2.840.113556.1.8000.2554.58783.21864.3474.19410.44358.58254.41281.46343"
}
],
"status": "current",
"mode": "working",
"code": {
"coding": [
{
"system": "https://profiles.ihe.net/ITI/MHD/CodeSystem/MHDlistTypes",
"code": "submissionset"
}
]
},
"subject": {
"reference": "urn:uuid:51eb4fab-9d1a-4314-ad7c-363fc430f52c"
},
"date": "2004-10-25T23:50:50-05:00",
"entry": [
{
"item": {
"reference": "urn:uuid:f494ac72-be69-4910-baf4-0cce4a45e7c1"
}
}
]
},
"request": {
"method": "POST",
"url": "List"
}
},
{
"fullUrl": "urn:uuid:f494ac72-be69-4910-baf4-0cce4a45e7c1",
"resource": {
"resourceType": "DocumentReference",
"id": "f494ac72-be69-4910-baf4-0cce4a45e7c1",
"meta": {
"profile": [
"https://profiles.ihe.net/ITI/MHD/StructureDefinition/IHE.MHD.Minimal.DocumentReference"
],
"security": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
"code": "HTEST"
}
]
},
"masterIdentifier": {
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:1.2.840.113556.1.8000.2554.53432.348.12973.17740.34205.4355.50220.62012"
},
"status": "current",
"subject": {
"reference": "urn:uuid:51eb4fab-9d1a-4314-ad7c-363fc430f52c"
},
"content": [
{
"attachment": {
"contentType": "text/plain",
"url": "urn:uuid:4d14267b-19ff-4237-a301-4cdcfd67d4f9",
"size": 11,
"hash": "MGE0ZDU1YThkNzc4ZTUwMjJmYWI3MDE5NzdjNWQ4NDBiYmM0ODZkMA=="
},
"format": {
"system": "http://ihe.net/fhir/ihe.formatcode.fhir/CodeSystem/formatcode",
"code": "urn:ihe:iti:xds-sd:text:2008"
}
}
]
},
"request": {
"method": "POST",
"url": "DocumentReference"
}
},
{
"fullUrl": "urn:uuid:4d14267b-19ff-4237-a301-4cdcfd67d4f9",
"resource": {
"resourceType": "Binary",
"id": "4d14267b-19ff-4237-a301-4cdcfd67d4f9",
"meta": {
"security": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
"code": "HTEST"
}
]
},
"contentType": "text/plain",
"data": "SGVsbG8gV29ybGQ="
},
"request": {
"method": "POST",
"url": "Binary"
}
},
{
"fullUrl": "urn:uuid:51eb4fab-9d1a-4314-ad7c-363fc430f52c",
"resource": {
"resourceType": "Patient",
"id": "51eb4fab-9d1a-4314-ad7c-363fc430f52c",
"meta": {
"security": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
"code": "HTEST"
}
]
},
"name": [
{
"family": "Schmidt",
"given": [
"Dee"
]
}
]
},
"request": {
"method": "POST",
"url": "Patient"
}
}
]
}
4 changes: 4 additions & 0 deletions pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -913,6 +913,10 @@
<id>thetrueoneshots</id>
<name>Gijs Groenewegen</name>
</developer>
<developer>
<id>subigre</id>
<name>Renaud Subiger</name>
</developer>
</developers>

<licenses>
Expand Down
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