Libmesh update

conda/libmesh/build.sh

@@ -74,10 +74,10 @@ fi
 
 source $SRC_DIR/configure_libmesh.sh
 export INSTALL_BINARY="${SRC_DIR}/build-aux/install-sh -C"
-METHODS="opt oprof devel dbg" configure_libmesh --prefix=${PREFIX}/libmesh \
-                                                --with-vtk-lib=${BUILD_PREFIX}/libmesh-vtk/lib \
-                                                --with-vtk-include=${BUILD_PREFIX}/libmesh-vtk/include/vtk-${SHORT_VTK_NAME} \
-                                                $*
+LIBMESH_DIR=${PREFIX}/libmesh METHODS="opt oprof devel dbg" \
+  configure_libmesh --with-vtk-lib=${BUILD_PREFIX}/libmesh-vtk/lib \
+                    --with-vtk-include=${BUILD_PREFIX}/libmesh-vtk/include/vtk-${SHORT_VTK_NAME} \
+                    $*
 
 make -j $CPU_COUNT
 make install

conda/libmesh/meta.yaml

@@ -1,7 +1,7 @@
 # Do not use jinja templating (A physical change to this file is required to trigger a build)
-{% set build = 4 %}
+{% set build = 0 %}
 {% set strbuild = "build_" + build|string %}
-{% set version = "2021.10.27" %}
+{% set version = "2021.11.11" %}
 
 package:
   name: moose-libmesh

conda/mpich/conda_build_config.yaml

@@ -2,7 +2,7 @@
 ## Any changes made will require additional changes to any item above that.
 
 moose_libmesh:
-  - moose-libmesh 2021.10.27 build_4
+  - moose-libmesh 2021.11.11 build_0
 
 SHORT_VTK_NAME:
   - 9.1

modules/doc/content/newsletter/2021_11.md

@@ -43,4 +43,27 @@ If any issues with the new packages are experienced, please open a new
 
 ## libMesh-level Changes
 
+- Changes to dual shape function initialization to enable edge
+  dropping and 3D mortar problems.
+- Refactored autoconf compiler option selection, to allow for testing
+  of submodules with stricter compiler settings.
+- Reduced Basis support for Empirical Interpolation Method
+  incorporation of integral terms on element sides.
+- API support for selecting SVD as a preconditioner type
+- Improvements to the ``calculator'' app, for visualizing projections
+  of parsed functions on meshes (and, optionally, pre-existing
+  solutions), to allow it to optionally noutput numeric integrals
+  instead.
+- Fix (or at least workaround for a compiler bug) for broken JIT
+  parsed function compilation on Apple M1 compilers. 
+- Fix for broken TIMPI communication of standard library structured
+  classes of large strings.
+- Fix for potential leak of TIMPI derived data types, causing valgrind
+  errors in some use cases.
+- Assorted minor bugfixes: for Exodus IGA reads of files with multiple
+  element blocks, for Exodus IGA files with homogeneous (implicit)
+  element weights, for element quality calculations on infinite hexes,
+  and for Xdr header writes and a potentially uninitialized Xdr
+  version variable.
+
 ## Bug Fixes and Minor Enhancements

scripts/configure_libmesh.sh

@@ -19,11 +19,17 @@ function configure_libmesh()
     echo "SRC_DIR is not set for configure_libmesh"
     exit 1
   fi
+
   if [ ! -d "$SRC_DIR" ]; then
     echo "$SRC_DIR=SRC_DIR does not exist"
     exit 1
   fi
 
+  if [ -z "$LIBMESH_DIR" ]; then
+    echo "$LIBMESH_DIR is not set for configure_libmesh"
+    exit 1
+  fi
+
   if [ -z "$METHODS" ]; then
     echo "METHODS must be set in configure_libmesh"
     exit 1
@@ -49,6 +55,8 @@ function configure_libmesh()
                --with-cxx-std-min=2014 \
                --without-gdb-command \
                --with-methods="${METHODS}" \
+               --prefix="${LIBMESH_DIR}" \
+               --with-future-timpi-dir="${LIBMESH_DIR}" \
                INSTALL="${INSTALL_BINARY}" \
                $*
 

scripts/update_and_rebuild_libmesh.sh

@@ -163,8 +163,7 @@ if [ -z "$go_fast" ]; then
   fi
 
   source $SCRIPT_DIR/configure_libmesh.sh
-  SRC_DIR=${SCRIPT_DIR}/../libmesh configure_libmesh --prefix=$LIBMESH_DIR \
-                                                     $DISABLE_TIMESTAMPS \
+  SRC_DIR=${SCRIPT_DIR}/../libmesh configure_libmesh $DISABLE_TIMESTAMPS \
                                                      $VTK_OPTIONS \
                                                      $* | tee -a "$SCRIPT_DIR/$DIAGNOSTIC_LOG" || exit 1
 else