Skip to content

Commit

Permalink
add "Installation" header
Browse files Browse the repository at this point in the history
  • Loading branch information
kozo2 committed Apr 14, 2016
1 parent 0b36d23 commit aa7cd46
Showing 1 changed file with 7 additions and 2 deletions.
9 changes: 7 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -14,15 +14,20 @@ If you use **KEGGscape** in your research, please cite:


## Introduction
[Cytoscape](http://www.cytoscape.org/) is a de-facto standard bioinformatics software platform for integrating, analyzing, and visualizing biological network data. __*KEGGscape*__ is a [Cytoscape App](http://apps.cytoscape.org/) to provide comprehensive support for KEGG Pathway database and other resources available in KEGG. KEGGScape uses only basic data structures in Cytoscape core, and users can use powerful Cytoscape core features to visualize additional (experimental) data sets on top of KEGG pathways.
[Cytoscape](http://www.cytoscape.org/) is a de-facto standard bioinformatics software platform for integrating, analyzing, and visualizing biological network data. __*KEGGscape*__ is a [Cytoscape App](http://apps.cytoscape.org/) to provide comprehensive support for KEGG Pathway database and other resources available in KEGG. KEGGscape uses only basic data structures in Cytoscape core, and users can use powerful Cytoscape core features to visualize additional (experimental) data sets on top of KEGG pathways.

### About KEGG

![](http://cl.ly/XbS7/kegg_sugar1.png)

[KEGG Pathway database](http://www.genome.jp/kegg/pathway.html) is one of the most
comprehensive databases of human-curated biological pathways. [KGML (KEGG Markup Language)](http://www.kegg.jp/kegg/xml/) is
the file format to represent KEGG Pathway data files in XML. KEGGScape uses those KGML files as its primary source of pathway data.
the file format to represent KEGG Pathway data files in XML. KEGGscape uses those KGML files as its primary source of pathway data.

## Installation

You can install **KEGGscape** with Cytoscape app manager.
![](http://cl.ly/253o2O2l1X1v/kesscape-appstore.png)

## Tutorials
- [Quick start guide](https://github.com/idekerlab/KEGGscape/wiki/Quick-Start-Guide)
Expand Down

0 comments on commit aa7cd46

Please sign in to comment.