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kozo2 edited this page Nov 13, 2014 · 9 revisions

Installation

  1. Run App Manager from menubar (Apps -> App Manager)
  2. Select and install KEGGscape

Importing KGML by KEGGscape

From file

  1. Download KGML from KEGG, you can find the KGML download link in KEGG pathway menu
  2. Import KGML from menubar (File -> Import -> Network -> File)

From URL

  1. Import KGML over the internet from menubar (File -> Import -> Network -> URL)
  2. For example the URL is like http://rest.kegg.jp/get/eco00010/kgml. In this case you will import eco00010 (E. coli Glycolysis pathway).