CRAFT

Community-based Retro-synthetic Analysis Functional plaTform

Overview

CRAFT is a integrated software for crafting synthetic biological system. It provides concise and convenient user interface, where you can customize your own synthetic biological system by using specific algorithms to search appropriate circuits and simulate and your validation experiment will be supported with our standard protocols. Your also can share your designs in user community, help others by searching solutions or sharing your computing resources, or upload your experiment data to improve the accuracy of our model.

Dependences

Algorithm

• gcc g++ gfortran
• subversion
• patch
• wget
• cmake
• ipopt - https://projects.coin-or.org/Ipopt
• openblas - http://www.openblas.net/

Front end

• Semantic UI - http://semantic-ui.com/
• jQuery - https://jquery.com/
• Chart.js - http://www.chartjs.org/
• Sweetalert2 - https://limonte.github.io/sweetalert2/
• AngularPlasmid - https://github.com/vixis/angularplasmid
• Plax - http://cameronmcefee.com/blog/plax
• Backstretch - http://srobbin.com/jquery-plugins/backstretch/
• jQuery-MD5 - https://github.com/placemarker/jQuery-MD5
• Semantic-UI-range - https://github.com/tyleryasaka/semantic-ui-range

Back end

• flask - http://flask.pocoo.org/
• wkhtmltopdf - http://wkhtmltopdf.org
• flask sqlalchemy - http://flask-sqlalchemy.pocoo.org/2.1/
• xlrd
• pytz
• pdfkit
• uwsgi
• nginx

Installation

Please check our release.

Documentation

Please visit our online help page:CRAFT HELP

About

Developed by SYSU-Software team. Base on GPL-3.0 licence.