Adds genome coordinates output in ruler mode

igvteam · Nov 17, 2017 · d6ba30d · d6ba30d
1 parent 34ce203
commit d6ba30d
Show file tree

Hide file tree

Showing 2 changed files with 9 additions and 0 deletions.
diff --git a/src/org/broad/igv/ui/IGV.java b/src/org/broad/igv/ui/IGV.java
@@ -2073,6 +2073,9 @@ public Future startUp(Main.IGVArgs igvArgs) {
     }
 
     public void setRulerEnabled(boolean rulerEnabled) {
+        if (!rulerEnabled){
+            setStatusBarMessage3("");
+        }
         this.rulerEnabled = rulerEnabled;
     }
 

diff --git a/src/org/broad/igv/ui/panel/DataPanelContainer.java b/src/org/broad/igv/ui/panel/DataPanelContainer.java
@@ -148,6 +148,12 @@ protected void paintChildren(Graphics g) {
             int start = MouseInfo.getPointerInfo().getLocation().x - getLocationOnScreen().x;
             g.setColor(Color.BLACK);
             g.drawLine(start, 0, start, getHeight());
+
+            if (!FrameManager.isGeneListMode()) {
+                ReferenceFrame frame = FrameManager.getDefaultFrame();
+                int pos = (int) frame.getChromosomePosition(start) + 1;
+                IGV.getInstance().setStatusBarMessage3(" " + Integer.toString(pos));
+            }
         }
     }