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htsget
helgathorv edited this page Aug 13, 2021
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As of release 2.11.0 IGV supports loading BAM, CRAM, and VCF data from htsget servers. Note BCF is not supported.
To load data from an htsget server use File > Load from URL... and enter the full URL to the resource.
hg38 Alignments: https://htsget.ga4gh.org/reads/giab.NA12878.NIST7086.1
hg38 Variants: https://htsget.ga4gh.org/variants/giab.NA12878