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Update DEPENDENCIES.md
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qtrinh committed Apr 3, 2017
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Expand Up @@ -32,6 +32,17 @@ Copy weka.jar into bin ${ISOWN_HOME}/bin
```$
cp weka-3-6-13/weka.jar ${ISOWN_HOME}/bin
```

## ANNOVAR
Download ANNOVAR from http://annovar.openbioinformatics.org/en/latest/user-guide/download/ and uncompress it. Note: ANNOVAR requires user registration.
```$
tar xvf annovar.latest.tar.gz
```
Add ANNOVAR to PATH
```$
export PATH=$PATH:/path_to_annovar
```

## Check dependencies
Run the following command to check to make sure all dependencies are installed:
```$
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