wsdt

Repo for the watershed on distance transform.

Installation for development:

We recommend development using conda/mamba:

> mamba create -n wsdt-dev -c conda-forge -c ilastik-forge python=3.7 numpy-allocation-tracking numpy networkx nose jupyter notebook pip
> mamba activate wsdt-dev
> pip install -e .

Usage

For usage, see the two notebooks in the examples folder.

Install with conda (into an existing environment):

$ conda install -c conda-forge -c ilastik-forge wsdt