Skip to content
master
Go to file
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 
MD
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

README.md

MolModEdu

Educational/Research Materials on Molecular Modeling: Tutorials, Code Examples and Templates, Resources, Course Materials

Contents

  1. Molecular Dynamics Simulations

  2. Protein structure prediction

  3. Miscellaneous

Molecular Dynamics Simulations

MD: Courses and educational materials

MD: Tutorials

General introduction to MD

Here we offer two tutorials, a quick one for beginners and an in-depth one. The first one is indended to be as simple as possible with detailed instuctions, the second one requires more technical skills and independent work.

  1. A basic beginner's tutorial on MD simulations in Gromacs
  2. An in-depth Gromacs MD tutorial: simulating nucleosome dynamics. GROMACS/nucl

MD: Code examples and templates

Gromacs

Gromacs Resources

NAMD

MDAnalysis

Homology modeling using MODELLER

PHENIX - Molecular modeling for X-ray crystallography

https://www.phenix-online.org

About

Educational Notes on Molecular Modeling

Resources

Releases

No releases published

Packages

No packages published
You can’t perform that action at this time.