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Space button if spatial information is available for cells #16

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cornhundred opened this issue Jun 5, 2019 · 1 comment
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Space button if spatial information is available for cells #16

cornhundred opened this issue Jun 5, 2019 · 1 comment
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cornhundred commented Jun 5, 2019 •
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Add SPACE button for row/column reordering. Space will reorder components by their spatial positions if available. MIBI (MICSS or spatial genomics) images for instance will have spatial positioning. Rows/genes might also have positioning if getting data from FISH (https://www.nature.com/articles/s41467-017-02714-7), but position data will be for the most part concerning cells.

Spatial Transcriptomics
http://www.spatialtranscriptomicsresearch.org/datasets/
@cornhundred cornhundred self-assigned this Jun 5, 2019
@cornhundred cornhundred mentioned this issue Jun 5, 2019
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@cornhundred cornhundred added the enhancement New feature or request label Jun 5, 2019
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We're going to work with spatial transcriptomics using a separate linked view like in this example: https://github.com/ismms-himc/visium-clustergrammer2

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