mri-classification

Cardiac MRI classification using Recursive Neural Networks

Getting Started

1. Install requirements
2. Copy data folder to root directory

mri-classification
├── data  <-- this one
├── data.py
├── labeler.py
├── LICENSE
├── notebooks
├── project.py
├── README.md
├── requirements.txt
├── setup.py

3. Install current project as pip package (this is required for absolute imports)

pip install -e .

Labeler

Run Labeler

python labeler.py --start START

• START: starting index (if you wish to start labeling in the middle)

Interface Controls

• h: move backward by 10 slides
• l: move forward by 10 slides
• left-arrow: move backward by 1 slide
• right-arrow: move forward by 1 slide
• [1-5]: select current label (oap to obs)
• left-click: label the slice under the cursor
• spacebar: save labels

Data

Dataset Acronyms

• KAG: Kaggle Data
• CAT: CAP Training Data
• CAV: CAP Validation Data