Updates to build system

jakobilab · Mar 10, 2023 · 2219954 · 2219954
1 parent 8104e06
commit 2219954
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Showing 3 changed files with 8 additions and 27 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -1,3 +1,3 @@
 [build-system]
-requires = ['setuptools>=40']
-build-backend = 'setuptools.build_meta'
+requires = ['setuptools>=40', 'wheel']
+build-backend = 'setuptools.build_meta'
diff --git a/requirements.txt b/requirements.txt
diff --git a/setup.cfg b/setup.cfg
@@ -32,28 +32,18 @@ zip_safe = False
 platforms = Linux, Darwin
 include_package_data = True
 python_requires = >=3.7
-install_requires =  numpy>=1.14.5
-                    HTSeq>=0.11.0
-                    pysam>=0.16.0.1
+install_requires =  pysam==0.17.0
                     pybedtools>=0.7.10
-                    biopython>=1.71
+                    biopython==1.79
                     scipy>=0.19.0
-                    reportlab>=3.3.0
+                    reportlab==3.5.68
                     pandas>=0.25.0
-                    statsmodels >= 0.9.0
+                    statsmodels==0.9.0
+                    numpy>=1.14.5
+                    HTSeq==2.0.0
 
 packages = find:
 
-setup_requires = numpy
-
-[options.extras_require]
-web = nicegui >= 1.1.6
-      feedparser >= 5.2.1
-      python-dateutil >= 2.8.2
-      fastapi<0.89.0,>=0.88.0
-      pydantic >= 1.10.4
-      Pygments >= 2.14.0
-
 [options.entry_points]
 console_scripts =
     circtools_install_R_dependencies = circtools.scripts.r_runner:install_R_dependencies