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Popular repositories

  1. get_SRA_fastqs get_SRA_fastqs Public

    Snakemake workflow to grab raw fastqs from SRA from SRR, SRX, SRP, or PJRNA accession numbers

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  2. NMF_simulations NMF_simulations Public

    generation of simulated NMF patterns and resulting expression matrices

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  3. Kallistobus-workflow Kallistobus-workflow Public

    Barebones velocity-compatible kallisto bus workflow to generate count matrices

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  4. gofflab_sc_kallisto gofflab_sc_kallisto Public

    Forked from gofflab/gofflab_sc_kallisto

    Single Cell Preprocessing workflow for Kallisto + RNAVelocity for Goff Lab Projects

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  5. convert_sc_format convert_sc_format Public

    Convert monocle cds object to anndata .h5ad format

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  6. projectR projectR Public

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