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  1. MalikLab_bioinformaticsResources MalikLab_bioinformaticsResources Public

    HTML 1

  2. MKtests_JY MKtests_JY Public

    R functions to perform McDonald-Kreitman tests

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  3. Arp53D_popCage Arp53D_popCage Public

    population cage modelling for Schroeder et al, 2021

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  4. genomicSeq_callSNPs genomicSeq_callSNPs Public

    simple folder to teach Courtney and Risa how to call SNPs in genomic sequence (Drosophila)

  5. pamlApps pamlApps Public

    utilities to parse and plot PAML output

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  6. pamlWrapper pamlWrapper Public

    starting with an in-frame alignment, run PAML and parse output

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