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Bug Fix Release 1.3.2

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commit 0c59ee410dcad272d037c6f7a9a62454ea6bdc7d 1 parent c298b51
Johannes Goll authored

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  1. +14 2 README
  2. +58 0 README~
16 README
@@ -13,6 +13,17 @@ Please visit the project's wiki page at http://wiki.github.com/jcvi/METAREP
13 13 for additional information
14 14
15 15 RELEASE NOTES
  16 +
  17 +JCVI Metagenomics Reports - Version 1.3.2 (bug fix release)
  18 +
  19 +Bug Fixes:
  20 +
  21 +METAREP-477 Mosaic Plot option was missing in scripts/r/plots.r
  22 +METAREP-478 Population creation process expected core organization by project ID;
  23 +the process was fixed to work with a root level core organization as
  24 +generated by the metarep_loader.pl script.
  25 +--
  26 +
16 27 JCVI Metagenomics Reports - Version 1.3.1
17 28
18 29 New Feature:
@@ -27,7 +38,7 @@ METAREP-205 sequence export option for search page
27 38
28 39 Bug Fixes:
29 40 METAREP-408 fix compare panel misalignment
30   -
  41 +--
31 42
32 43 JCVI Metagenomics Reports - Version 1.2.0
33 44
@@ -43,7 +54,7 @@ METAREP-248 - Implemented PHP based load balancing option
43 54
44 55 Bug
45 56 METAREP-246 - Fix View Download Cache Issue
46   -
  57 +--
47 58
48 59 JCVI Metagenomics Reports - Version 1.1.0
49 60
@@ -56,3 +67,4 @@ METAREP-220 - Fixed search example links in search help dialog
56 67 METAREP-221 - Use new radio buttons in compare page to limit selection to project datasets
57 68 METAREP-223 - Compare datasets using Wilcoxon Rank Sum Test
58 69 METAREP-224 - Ajax support for search dataset pages
  70 +--
58 README~
... ... @@ -0,0 +1,58 @@
  1 +METAREP DIRECTORIES
  2 +/app web application files
  3 +/cake cake framework files
  4 +/data example datasets
  5 +/scripts perl and R scripts
  6 +/doc documentation
  7 +/db relational databases
  8 +/solr solr/lucene configuration files
  9 +/vendors 3rd-party php tools
  10 +
  11 +ADDTIONAL INFORMATION
  12 +Please visit the project's wiki page at http://wiki.github.com/jcvi/METAREP
  13 +for additional information
  14 +
  15 +RELEASE NOTES
  16 +JCVI Metagenomics Reports - Version 1.3.1
  17 +
  18 +New Feature:
  19 +METAREP-391 update viral evidence summary for view page
  20 +METAREP-409 update NCBI taxonomy, KEGG, GO, and enzymes:
  21 +
  22 +NCBI taxonomy version 09/30/2011: 280,602 new taxa KEGG version 09/01/2011: 21 new KEGG KO pathways; 1 new KEGG EC pathway Gene Ontology version 09/05/2011
  23 +
  24 +METAREP-407 implement GO slim support for compare page
  25 +METAREP-406 implement mosaic plot option for compare page
  26 +METAREP-205 sequence export option for search page
  27 +
  28 +Bug Fixes:
  29 +METAREP-408 fix compare panel misalignment
  30 +
  31 +
  32 +JCVI Metagenomics Reports - Version 1.2.0
  33 +
  34 +Improvement
  35 +METAREP-244 - Increased speed of web page build-up
  36 +METAREP-247 - Integrate new METAREP logo into web layout
  37 +
  38 +New Feature
  39 +METAREP-228 - Added unresolved taxonomy fractions to Browse APIS pages
  40 +METAREP-243 - Search datasets using name based searches for Taxonomy, HMM, Enzymes, GO and KEGG pathway names
  41 +METAREP-245 - Added search option to filter Browse Taxonomy/GO/Pathway/EC pages
  42 +METAREP-248 - Implemented PHP based load balancing option
  43 +
  44 +Bug
  45 +METAREP-246 - Fix View Download Cache Issue
  46 +
  47 +
  48 +JCVI Metagenomics Reports - Version 1.1.0
  49 +
  50 +New Feature
  51 +METAREP-215 - Search all datasets option; generate meta-information summaries
  52 +METAREP-217 - Allow users to test METAREP without creating an account
  53 +METAREP-218 - Allow distance matrix export for hierarchical clustering, heatmap, mds plots
  54 +METAREP-219 - Added color legend to heatmap
  55 +METAREP-220 - Fixed search example links in search help dialog
  56 +METAREP-221 - Use new radio buttons in compare page to limit selection to project datasets
  57 +METAREP-223 - Compare datasets using Wilcoxon Rank Sum Test
  58 +METAREP-224 - Ajax support for search dataset pages

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