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Bug Fix Release 1.3.2

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commit 0c59ee410dcad272d037c6f7a9a62454ea6bdc7d 1 parent c298b51
Johannes Goll authored
Showing with 72 additions and 2 deletions.
  1. +14 −2 README
  2. +58 −0 README~
16 README
View
@@ -13,6 +13,17 @@ Please visit the project's wiki page at http://wiki.github.com/jcvi/METAREP
for additional information
RELEASE NOTES
+
+JCVI Metagenomics Reports - Version 1.3.2 (bug fix release)
+
+Bug Fixes:
+
+METAREP-477 Mosaic Plot option was missing in scripts/r/plots.r
+METAREP-478 Population creation process expected core organization by project ID;
+the process was fixed to work with a root level core organization as
+generated by the metarep_loader.pl script.
+--
+
JCVI Metagenomics Reports - Version 1.3.1
New Feature:
@@ -27,7 +38,7 @@ METAREP-205 sequence export option for search page
Bug Fixes:
METAREP-408 fix compare panel misalignment
-
+--
JCVI Metagenomics Reports - Version 1.2.0
@@ -43,7 +54,7 @@ METAREP-248 - Implemented PHP based load balancing option
Bug
METAREP-246 - Fix View Download Cache Issue
-
+--
JCVI Metagenomics Reports - Version 1.1.0
@@ -56,3 +67,4 @@ METAREP-220 - Fixed search example links in search help dialog
METAREP-221 - Use new radio buttons in compare page to limit selection to project datasets
METAREP-223 - Compare datasets using Wilcoxon Rank Sum Test
METAREP-224 - Ajax support for search dataset pages
+--
58 README~
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@@ -0,0 +1,58 @@
+METAREP DIRECTORIES
+/app web application files
+/cake cake framework files
+/data example datasets
+/scripts perl and R scripts
+/doc documentation
+/db relational databases
+/solr solr/lucene configuration files
+/vendors 3rd-party php tools
+
+ADDTIONAL INFORMATION
+Please visit the project's wiki page at http://wiki.github.com/jcvi/METAREP
+for additional information
+
+RELEASE NOTES
+JCVI Metagenomics Reports - Version 1.3.1
+
+New Feature:
+METAREP-391 update viral evidence summary for view page
+METAREP-409 update NCBI taxonomy, KEGG, GO, and enzymes:
+
+NCBI taxonomy version 09/30/2011: 280,602 new taxa KEGG version 09/01/2011: 21 new KEGG KO pathways; 1 new KEGG EC pathway Gene Ontology version 09/05/2011
+
+METAREP-407 implement GO slim support for compare page
+METAREP-406 implement mosaic plot option for compare page
+METAREP-205 sequence export option for search page
+
+Bug Fixes:
+METAREP-408 fix compare panel misalignment
+
+
+JCVI Metagenomics Reports - Version 1.2.0
+
+Improvement
+METAREP-244 - Increased speed of web page build-up
+METAREP-247 - Integrate new METAREP logo into web layout
+
+New Feature
+METAREP-228 - Added unresolved taxonomy fractions to Browse APIS pages
+METAREP-243 - Search datasets using name based searches for Taxonomy, HMM, Enzymes, GO and KEGG pathway names
+METAREP-245 - Added search option to filter Browse Taxonomy/GO/Pathway/EC pages
+METAREP-248 - Implemented PHP based load balancing option
+
+Bug
+METAREP-246 - Fix View Download Cache Issue
+
+
+JCVI Metagenomics Reports - Version 1.1.0
+
+New Feature
+METAREP-215 - Search all datasets option; generate meta-information summaries
+METAREP-217 - Allow users to test METAREP without creating an account
+METAREP-218 - Allow distance matrix export for hierarchical clustering, heatmap, mds plots
+METAREP-219 - Added color legend to heatmap
+METAREP-220 - Fixed search example links in search help dialog
+METAREP-221 - Use new radio buttons in compare page to limit selection to project datasets
+METAREP-223 - Compare datasets using Wilcoxon Rank Sum Test
+METAREP-224 - Ajax support for search dataset pages
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