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Feature Request: Provide access to alignment score #69
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And I see this just now. Its in the new branch.
…On Fri, 16 Aug 2024, 1:33 pm Rob Patro, ***@***.***> wrote:
If the user is building an Aligner with the cigar option, it will be very
useful to have access to the computed alignment score (what would arise as
the AS tag if we were producing a SAM file with minimap2). Would it be
easy to add support for accessing this information? I believe it is
computed and stored in the ksw result which is exposed in the sys crate.
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Ok, dumb question --- what invocation should I make in my Cargo.toml if I want to have both this branch of
but I get the error:
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@rob-p I've just set the Cargo.toml to be a specific version, run cargo update and you should be good to go. |
Bravo! Thanks :). |
This is merged into the main branch. Won't push a release out until we've added all the new features and handled the bugs you dig up though! |
Thanks @jguhlin; it seems to be working great for our purposes! |
This is working great and we can replicate the precise results of command-line |
If the user is building an Aligner with the cigar option, it will be very useful to have access to the computed alignment score (what would arise as the
AS
tag if we were producing a SAM file withminimap2
). Would it be easy to add support for accessing this information? I believe it is computed and stored in the ksw result which is exposed in the sys crate.The text was updated successfully, but these errors were encountered: