Temporary files for processes are now stored in WorkSpace rather than…

… tmpdir. * also removed auto-generated licence header
jiwalker-usgs · Feb 21, 2014 · 508e8f7 · 508e8f7
1 parent ddea73d
commit 508e8f7
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Showing 9 changed files with 19 additions and 15 deletions.
diff --git a/...rc/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureCategoricalGridCoverageAlgorithm.java b/...rc/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureCategoricalGridCoverageAlgorithm.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.algorithm;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.coreprocessing.Delimiter;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.FeatureCategoricalGridCoverage;
 import gov.usgs.cida.gdp.wps.binding.CSVFileBinding;
@@ -110,7 +111,7 @@ public void process() {
 
         try {
 
-            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension);
+            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension, new File(AppConstant.WORK_LOCATION.getValue()));
             writer = new BufferedWriter(new FileWriter(output));
 
             for (String currentDatasetId : datasetId) {

diff --git a/...ain/java/gov/usgs/cida/gdp/wps/algorithm/FeatureCoverageOPeNDAPIntersectionAlgorithm.java b/...ain/java/gov/usgs/cida/gdp/wps/algorithm/FeatureCoverageOPeNDAPIntersectionAlgorithm.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.algorithm;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.wps.binding.GMLStreamingFeatureCollectionBinding;
 import gov.usgs.cida.gdp.wps.binding.NetCDFFileBinding;
 import java.io.File;
@@ -104,7 +105,7 @@ public void process() {
         GridDataset gridDataSet = null;
         try { 
             gridDataSet = GDPAlgorithmUtil.generateGridDataSet(datasetURI);
-            output = File.createTempFile(getClass().getSimpleName(), ".nc");
+            output = File.createTempFile(getClass().getSimpleName(), ".nc", new File(AppConstant.WORK_LOCATION.getValue()));
             NetCDFGridWriter.makeFile(
                     output.getAbsolutePath(),
                     gridDataSet,

diff --git a/...ess-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureGridStatisticsAlgorithm.java b/...ess-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureGridStatisticsAlgorithm.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.algorithm;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.coreprocessing.Delimiter;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.FeatureCoverageGridStatistics;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.Statistics1DWriter.GroupBy;
@@ -182,7 +183,7 @@ public void process() {
                 return;
             }
 
-            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension);
+            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension, new File(AppConstant.WORK_LOCATION.getValue()));
             writer = new BufferedWriter(new FileWriter(output));
 
             for (String currentDatasetId : datasetId) {

diff --git a/...src/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureWeightedGridStatisticsAlgorithm.java b/...src/main/java/gov/usgs/cida/gdp/wps/algorithm/FeatureWeightedGridStatisticsAlgorithm.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.algorithm;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.coreprocessing.Delimiter;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.FeatureCoverageWeightedGridStatistics;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.Statistics1DWriter.GroupBy;
@@ -181,7 +182,7 @@ public void process() {
                 addError("Attribute " + featureAttributeName + " not found in feature collection");
                 return;
             }
-            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension);
+            output = File.createTempFile(getClass().getSimpleName(), delimiter.extension, new File(AppConstant.WORK_LOCATION.getValue()));
             writer = new BufferedWriter(new FileWriter(output));
 
             for (String currentDatasetId : datasetId) {

diff --git a/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/GDPAlgorithmConstants.java b/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/GDPAlgorithmConstants.java
@@ -1,7 +1,3 @@
-/*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
 package gov.usgs.cida.gdp.wps.algorithm;
 
 /**

diff --git a/...ss-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/PRMSParameterGeneratorAlgorithm.java b/...ss-wps/src/main/java/gov/usgs/cida/gdp/wps/algorithm/PRMSParameterGeneratorAlgorithm.java
@@ -1,6 +1,7 @@
 package gov.usgs.cida.gdp.wps.algorithm;
 
 import com.google.common.base.Joiner;
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.coreprocessing.Delimiter;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.FeatureCoverageWeightedGridStatistics;
 import gov.usgs.cida.gdp.coreprocessing.analysis.grid.Statistics1DWriter.GroupBy;
@@ -244,8 +245,8 @@ public void process() {
                 addError("Attribute " + featureAttributeName + " is not Numeric type, unable to properly index HRU");
             }
 
-            prmsParamFile = File.createTempFile(getClass().getSimpleName(), ".param");
-            prmsDataFile = File.createTempFile(getClass().getSimpleName(), ".data");
+            prmsParamFile = File.createTempFile(getClass().getSimpleName(), ".param", new File(AppConstant.WORK_LOCATION.getValue()));
+            prmsDataFile = File.createTempFile(getClass().getSimpleName(), ".data", new File(AppConstant.WORK_LOCATION.getValue()));
 
             prmsParamWriter = new BufferedWriter(new FileWriter(prmsParamFile));
             prmsDataWriter = new BufferedWriter(new FileWriter(prmsDataFile));
@@ -267,7 +268,7 @@ public void process() {
                         timeEnd);
 
                 // TODO:  all I/O instances need try/finally cleanup
-                csvFileList.add(File.createTempFile(getClass().getSimpleName(), ".temp.csv"));
+                csvFileList.add(File.createTempFile(getClass().getSimpleName(), ".temp.csv", new File(AppConstant.WORK_LOCATION.getValue())));
                 BufferedWriter csvWriter = null;
                 try {
                     csvWriter = new BufferedWriter(new FileWriter(csvFileList.get(inputIndex)));
@@ -320,7 +321,7 @@ public void process() {
             FileInputStream prmsParamsInputStream = null;
             FileInputStream prmsDataInputStream = null;
             try {
-                output = File.createTempFile(getClass().getName(), ".zip");
+                output = File.createTempFile(getClass().getName(), ".zip", new File(AppConstant.WORK_LOCATION.getValue()));
                 zipOutputStream = new ZipOutputStream(
                         new FileOutputStream(output));
                 prmsParamsInputStream = new FileInputStream(prmsParamFile);

diff --git a/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/parser/GMLStreamingParser.java b/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/parser/GMLStreamingParser.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.parser;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.wps.binding.GMLStreamingFeatureCollectionBinding;
 import java.io.File;
 import java.io.IOException;
@@ -16,7 +17,7 @@ public GMLStreamingParser() {
     @Override
     public GMLStreamingFeatureCollectionBinding parse(InputStream input, String mimeType, String schema) {
         try {
-            File tempFile = File.createTempFile(getClass().getSimpleName(), ".xml");
+            File tempFile = File.createTempFile(getClass().getSimpleName(), ".xml", new File(AppConstant.WORK_LOCATION.getValue()));
             FileUtils.copyInputStreamToFile(input, tempFile);
 			return new GMLStreamingFeatureCollectionBinding(new GMLStreamingFeatureCollection(tempFile));
 		} catch (IOException e) {

diff --git a/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/parser/GeoTIFFParser.java b/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/parser/GeoTIFFParser.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.parser;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.wps.binding.GeoTIFFFileBinding;
 import gov.usgs.cida.gdp.wps.util.GeoTIFFUtil;
 import gov.usgs.cida.gdp.wps.util.MIMEMultipartStream;
@@ -35,7 +36,7 @@ public GeoTIFFFileBinding parse(InputStream inputStream, String mimeType, String
 
 		try {
 
-            tempFile = File.createTempFile(getClass().getSimpleName(), ".tmp");
+            tempFile = File.createTempFile(getClass().getSimpleName(), ".tmp", new File(AppConstant.WORK_LOCATION.getValue()));
             FileUtils.copyInputStreamToFile(inputStream, tempFile);
 
 			ByteBuffer buffer = ByteBuffer.allocate(4 + MIMEMultipartStream.MAX_BOUNDARY_LENGTH);

diff --git a/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/util/WCSUtil.java b/gdp-process-wps/src/main/java/gov/usgs/cida/gdp/wps/util/WCSUtil.java
@@ -1,5 +1,6 @@
 package gov.usgs.cida.gdp.wps.util;
 
+import gov.usgs.cida.gdp.constants.AppConstant;
 import gov.usgs.cida.gdp.dataaccess.CoverageMetaData;
 import java.io.BufferedOutputStream;
 import java.io.File;
@@ -309,7 +310,7 @@ public static File generateTIFFFile(URI wcsURI, String wcsIdentifier, Referenced
                     if (GeoTIFFUtil.isAllowedMimeType(contentType)) {
                         String contentTransferEncoding = headerMap.get("Content-Transfer-Encoding");
                         if (contentTransferEncoding != null) {
-                            tiffFile = File.createTempFile("gdp", ".tiff");
+                            tiffFile = File.createTempFile("gdp", ".tiff", new File(AppConstant.WORK_LOCATION.getValue()));
                             OutputStream tiffOutputStream = new BufferedOutputStream(new FileOutputStream(tiffFile));
                             mimeMultipartStream.readBodyData(tiffOutputStream, contentTransferEncoding);
                             tiffOutputStream.close();