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Some useful perl modules I have written:

  • Algorithms::Matrix: an object-oriented matrix manipulation and linear algebra library (requires Inline::C)

  • Algorithms::Cube: an object-oriented library for third order tensors (requires Algorithms::Matrix)

  • Algorithms::Graph: extends Graph::Undirected (requires Graph::Undirected)

  • Algorithms::FCM: fuzzy c-means clustering (requires Inline::C)

  • Algorithms::RVM: relevance vector machine for classification (requires Algorithms::Matrix)

  • Algorithms::TimeSeries: extends Algorithms::Matrix with methods for time series (requires Algorithms::Matrix)

  • Algorithms::Kernel: extends Algorithms::Matrix with methods to compute and manipulate kernels (requires Algorithms::Matrix)

  • Algorithms::HMM: hidden Markov model (requires Algorithms::Matrix)

  • Algorithms::GMM: Gaussian mixture model (requires Algorithms::Matrix)

  • HDF5: perl wrapper for the hdf5 library

  • CellH5: perl API to the CellH5 file format (requires HDF5)

  • Labstuff: perl objects to represent various lab items (requires Sereal)