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Hi 👋 I'm Joe.

I'm an ML engineer / data scientist at Glasgow Polyomics, University of Glasgow.

Joe's GitHub stats


  1. A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics

    Python 4 3

  2. A Gym environment to learn fragmentation strategies using reinforcement learning

    Jupyter Notebook

  3. Substructural discovery in untargeted metabolomics data using LDA topic modelling.

    Jupyter Notebook 8 8

  4. hlda Public

    Gibbs sampler for the Hierarchical Latent Dirichlet Allocation topic model

    Jupyter Notebook 138 39

  5. Interactive multi-omics data explorer to integrate and interactively explore transcripts, proteins and metabolites data.

    Jupyter Notebook 9 2

  6. Ranking metabolite (and other omics sets) by their activity levels via SVD

    Jupyter Notebook 2

341 contributions in the last year

Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Mon Wed Fri

Contribution activity

August 2022

Created 54 commits in 1 repository

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