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Extend metagenomeSeq #532

Merged
merged 4 commits into from Oct 3, 2015
Merged

Extend metagenomeSeq #532

merged 4 commits into from Oct 3, 2015

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jnpaulson
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This is a pull request adding extend_metagenomeSeq functionality. Puts metagenomeSeq as a suggests (with Biobase as a dependency (as every bioconductor package should be)).

jnpaulson and others added 4 commits September 17, 2015 06:06
@jnpaulson
Update IO-methods.R
3b6649b 
Updated import_biom function to take a biom-class object in memory and convert it to a phyloseq object.
@jnpaulson
adding IO tests for rich biom files in memory
bf6045e
@jnpaulson
test-IO add
515430c
@jnpaulson
adding phyloseq_to_metagenomeSeq functionality
24b122e
@jnpaulson jnpaulson mentioned this pull request Sep 30, 2015
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joey711 added a commit that referenced this pull request Oct 3, 2015
@joey711
Merge pull request #532 from jnpaulson/extend_metagenomeSeq
9de5221 
Extend metagenomeSeq
@joey711 joey711 merged commit 9de5221 into joey711:master Oct 3, 2015
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@jnpaulson @joey711