Merge pull request #1017 from minrk/39

freeze with mamba, add 3.9

repo2docker/buildpacks/conda/environment.frozen.yml

@@ -1,5 +1,5 @@
 # AUTO GENERATED FROM environment.py-3.7.yml, DO NOT MANUALLY MODIFY
-# Frozen on 2021-02-16 14:46:08 UTC
+# Frozen on 2021-02-22 12:26:46 UTC
 name: r2d
 channels:
   - conda-forge
@@ -8,9 +8,9 @@ channels:
 dependencies:
   - _libgcc_mutex=0.1=conda_forge
   - _openmp_mutex=4.5=1_gnu
-  - alembic=1.5.4=pyhd8ed1ab_0
+  - alembic=1.5.5=pyhd8ed1ab_0
   - anyio=2.1.0=py37h89c1867_0
-  - argon2-cffi=20.1.0=py37h5e8e339_2
+  - argon2-cffi=20.1.0=py37h8f50634_2
   - async_generator=1.10=py_0
   - attrs=20.3.0=pyhd3deb0d_0
   - babel=2.9.0=pyhd3deb0d_0
@@ -19,7 +19,7 @@ dependencies:
   - backports.functools_lru_cache=1.6.1=py_0
   - bleach=3.3.0=pyh44b312d_0
   - blinker=1.4=py_1
-  - brotlipy=0.7.0=py37h5e8e339_1001
+  - brotlipy=0.7.0=py37hb5d75c8_1001
   - c-ares=1.17.1=h36c2ea0_0
   - ca-certificates=2020.12.5=ha878542_0
   - certifi=2020.12.5=py37h89c1867_1
@@ -29,28 +29,29 @@ dependencies:
   - cryptography=3.4.4=py37hf1a17b8_0
   - decorator=4.4.2=py_0
   - defusedxml=0.6.0=py_0
-  - entrypoints=0.3=pyhd8ed1ab_1003
+  - entrypoints=0.3=py37hc8dfbb8_1002
   - idna=2.10=pyh9f0ad1d_0
   - importlib-metadata=3.4.0=py37h89c1867_0
   - importlib_metadata=3.4.0=hd8ed1ab_0
-  - ipykernel=5.4.2=py37h888b3d9_0
+  - ipykernel=5.5.0=py37h888b3d9_1
   - ipython=7.20.0=py37h888b3d9_2
   - ipython_genutils=0.2.0=py_1
   - ipywidgets=7.6.3=pyhd3deb0d_0
   - jedi=0.18.0=py37h89c1867_2
   - jinja2=2.11.3=pyh44b312d_0
   - json5=0.9.5=pyh9f0ad1d_0
-  - jsonschema=3.2.0=py_2
+  - jsonschema=3.2.0=py37hc8dfbb8_1
   - jupyter-offlinenotebook=0.2.1=pyhd8ed1ab_0
   - jupyter-resource-usage=0.5.1=pyhd8ed1ab_0
   - jupyter_client=6.1.11=pyhd8ed1ab_1
   - jupyter_core=4.7.1=py37h89c1867_0
-  - jupyter_server=1.3.0=py37h89c1867_0
+  - jupyter_server=1.4.0=py37h89c1867_0
   - jupyter_telemetry=0.1.0=pyhd8ed1ab_1
-  - jupyterhub-base=1.1.0=py37hc8dfbb8_5
-  - jupyterhub-singleuser=1.1.0=py37hc8dfbb8_5
+  - jupyterhub-base=1.3.0=py37h89c1867_0
+  - jupyterhub-singleuser=1.3.0=py37h89c1867_0
   - jupyterlab=3.0.7=pyhd8ed1ab_0
-  - jupyterlab_server=2.2.0=pyhd8ed1ab_0
+  - jupyterlab_pygments=0.1.2=pyh9f0ad1d_0
+  - jupyterlab_server=2.3.0=pyhd8ed1ab_0
   - jupyterlab_widgets=1.0.0=pyhd8ed1ab_1
   - krb5=1.17.2=h926e7f8_0
   - ld_impl_linux-64=2.35.1=hea4e1c9_2
@@ -61,27 +62,29 @@ dependencies:
   - libgcc-ng=9.3.0=h2828fa1_18
   - libgomp=9.3.0=h2828fa1_18
   - libnghttp2=1.43.0=h812cca2_0
-  - libsodium=1.0.18=h36c2ea0_1
+  - libsodium=1.0.18=h516909a_1
   - libssh2=1.9.0=hab1572f_5
   - libstdcxx-ng=9.3.0=h6de172a_18
   - mako=1.1.4=pyh44b312d_0
   - markupsafe=1.1.1=py37h5e8e339_3
   - mistune=0.8.4=py37h5e8e339_1003
   - nbclassic=0.2.6=pyhd8ed1ab_0
-  - nbconvert=5.6.1=py37hc8dfbb8_1
+  - nbclient=0.5.2=pyhd8ed1ab_0
+  - nbconvert=6.0.7=py37h89c1867_3
   - nbformat=5.1.2=pyhd8ed1ab_1
   - ncurses=6.2=h58526e2_4
-  - notebook=6.1.6=py37h89c1867_0
+  - nest-asyncio=1.4.3=pyhd8ed1ab_0
+  - notebook=6.2.0=py37h89c1867_0
   - nteract_on_jupyter=2.1.3=py_0
   - oauthlib=3.0.1=py_0
-  - openssl=1.1.1i=h7f98852_0
+  - openssl=1.1.1j=h7f98852_0
   - packaging=20.9=pyh44b312d_0
   - pamela=1.0.0=py_0
   - pandoc=2.11.4=h7f98852_0
   - pandocfilters=1.4.2=py_1
   - parso=0.8.1=pyhd8ed1ab_0
-  - pexpect=4.8.0=pyh9f0ad1d_2
-  - pickleshare=0.7.5=py_1003
+  - pexpect=4.8.0=py37hc8dfbb8_1
+  - pickleshare=0.7.5=py37hc8dfbb8_1002
   - pip=21.0.1=pyhd8ed1ab_0
   - prometheus_client=0.9.0=pyhd3deb0d_0
   - prompt-toolkit=3.0.16=pyha770c72_0
@@ -95,7 +98,7 @@ dependencies:
   - pyparsing=2.4.7=pyh9f0ad1d_0
   - pyrsistent=0.17.3=py37h5e8e339_2
   - pysocks=1.7.1=py37h89c1867_3
-  - python=3.7.9=hffdb5ce_100_cpython
+  - python=3.7.10=hffdb5ce_100_cpython
   - python-dateutil=2.8.1=py_0
   - python-editor=1.0.4=py_0
   - python-json-logger=2.0.1=pyh9f0ad1d_0
@@ -114,18 +117,17 @@ dependencies:
   - sqlite=3.34.0=h74cdb3f_0
   - terminado=0.9.2=py37h89c1867_0
   - testpath=0.4.4=py_0
-  - tk=8.6.10=h21135ba_1
+  - tk=8.6.10=hed695b0_1
   - tornado=6.1=py37h5e8e339_1
   - traitlets=5.0.5=py_0
   - typing_extensions=3.7.4.3=py_0
   - urllib3=1.26.3=pyhd8ed1ab_0
   - wcwidth=0.2.5=pyh9f0ad1d_2
   - webencodings=0.5.1=py_1
   - wheel=0.36.2=pyhd3deb0d_0
-  - widgetsnbextension=3.5.1=py37h89c1867_4
+  - widgetsnbextension=3.5.1=py37hc8dfbb8_4
   - xz=5.2.5=h516909a_1
   - zeromq=4.3.4=h9c3ff4c_0
   - zipp=3.4.0=py_0
   - zlib=1.2.11=h516909a_1010
 prefix: /opt/conda/envs/r2d
-

repo2docker/buildpacks/conda/environment.py-2.7.frozen.yml

@@ -1,5 +1,5 @@
 # AUTO GENERATED FROM environment.py-2.7.yml, DO NOT MANUALLY MODIFY
-# Frozen on 2021-02-16 14:41:11 UTC
+# Frozen on 2021-02-22 12:21:22 UTC
 name: r2d
 channels:
   - conda-forge
@@ -8,9 +8,9 @@ channels:
 dependencies:
   - _libgcc_mutex=0.1=conda_forge
   - _openmp_mutex=4.5=1_gnu
-  - backports=1.0=py_2
-  - backports.shutil_get_terminal_size=1.0.0=py_3
-  - backports_abc=0.5=py_1
+  - backports=1.0=py27_1
+  - backports.shutil_get_terminal_size=1.0.0=py27_1
+  - backports_abc=0.5=py27_0
   - ca-certificates=2020.12.5=ha878542_0
   - certifi=2019.11.28=py27h8c360ce_1
   - configparser=3.7.3=py27h8c360ce_2
@@ -20,7 +20,7 @@ dependencies:
   - futures=3.3.0=py27h8c360ce_1
   - ipykernel=4.8.2=py27_0
   - ipython=5.8.0=py27_1
-  - ipython_genutils=0.2.0=py_1
+  - ipython_genutils=0.2.0=py27_0
   - jupyter_client=5.3.4=py27_1
   - jupyter_core=4.6.3=py27h8c360ce_1
   - ld_impl_linux-64=2.35.1=hea4e1c9_2
@@ -30,12 +30,12 @@ dependencies:
   - libsodium=1.0.17=h516909a_0
   - libstdcxx-ng=9.3.0=h6de172a_18
   - ncurses=6.2=h58526e2_4
-  - openssl=1.1.1i=h7f98852_0
+  - openssl=1.1.1j=h7f98852_0
   - pathlib2=2.3.5=py27h8c360ce_1
-  - pexpect=4.8.0=pyh9f0ad1d_2
+  - pexpect=4.8.0=py27h8c360ce_1
   - pickleshare=0.7.5=py27h8c360ce_1001
   - pip=20.1.1=pyh9f0ad1d_0
-  - prompt_toolkit=1.0.15=py_1
+  - prompt_toolkit=1.0.15=py27_0
   - ptyprocess=0.7.0=pyhd3deb0d_0
   - pygments=2.5.2=py_0
   - python=2.7.15=h5a48372_1011_cpython
@@ -45,16 +45,15 @@ dependencies:
   - readline=8.0=he28a2e2_2
   - scandir=1.10.0=py27hdf8410d_1
   - setuptools=44.0.0=py27_0
-  - simplegeneric=0.8.1=py_1
-  - singledispatch=3.4.0.3=pyh9f0ad1d_1001
+  - simplegeneric=0.8.1=py27_0
+  - singledispatch=3.6.0=pyh44b312d_0
   - six=1.15.0=pyh9f0ad1d_0
   - sqlite=3.34.0=h74cdb3f_0
-  - tk=8.6.10=h21135ba_1
+  - tk=8.6.10=hed695b0_1
   - tornado=5.1.1=py27h14c3975_1000
   - traitlets=4.3.3=py27h8c360ce_1
   - wcwidth=0.1.9=pyh9f0ad1d_0
   - wheel=0.36.2=pyhd3deb0d_0
   - zeromq=4.3.2=he1b5a44_2
   - zlib=1.2.11=h516909a_1010
 prefix: /opt/conda/envs/r2d
-

repo2docker/buildpacks/conda/environment.py-3.6.frozen.yml

@@ -1,5 +1,5 @@
 # AUTO GENERATED FROM environment.py-3.6.yml, DO NOT MANUALLY MODIFY
-# Frozen on 2021-02-16 14:42:56 UTC
+# Frozen on 2021-02-22 12:25:15 UTC
 name: r2d
 channels:
   - conda-forge
@@ -8,18 +8,18 @@ channels:
 dependencies:
   - _libgcc_mutex=0.1=conda_forge
   - _openmp_mutex=4.5=1_gnu
-  - alembic=1.5.4=pyhd8ed1ab_0
+  - alembic=1.5.5=pyhd8ed1ab_0
   - anyio=2.1.0=py36h5fab9bb_0
   - argon2-cffi=20.1.0=py36h8f6f2f9_2
   - async_generator=1.10=py_0
   - attrs=20.3.0=pyhd3deb0d_0
   - babel=2.9.0=pyhd3deb0d_0
   - backcall=0.2.0=pyh9f0ad1d_0
-  - backports=1.0=py_2
+  - backports=1.0=py36_1
   - backports.functools_lru_cache=1.6.1=py_0
   - bleach=3.3.0=pyh44b312d_0
   - blinker=1.4=py_1
-  - brotlipy=0.7.0=py36h8f6f2f9_1001
+  - brotlipy=0.7.0=py36he6145b8_1001
   - c-ares=1.17.1=h36c2ea0_0
   - ca-certificates=2020.12.5=ha878542_0
   - certifi=2020.12.5=py36h5fab9bb_1
@@ -28,32 +28,33 @@ dependencies:
   - chardet=4.0.0=py36h5fab9bb_1
   - contextvars=2.4=py_0
   - cryptography=3.4.4=py36hc39840e_0
-  - dataclasses=0.7=pyhe4b4509_6
+  - dataclasses=0.7=py36_0
   - decorator=4.4.2=py_0
   - defusedxml=0.6.0=py_0
-  - entrypoints=0.3=pyhd8ed1ab_1003
+  - entrypoints=0.3=py36h9f0ad1d_1002
   - idna=2.10=pyh9f0ad1d_0
   - immutables=0.15=py36h8f6f2f9_0
   - importlib-metadata=3.4.0=py36h5fab9bb_0
   - importlib_metadata=3.4.0=hd8ed1ab_0
-  - ipykernel=5.4.2=py36he448a4c_0
+  - ipykernel=5.5.0=py36he448a4c_1
   - ipython=7.16.1=py36he448a4c_2
-  - ipython_genutils=0.2.0=py_1
+  - ipython_genutils=0.2.0=py36_0
   - ipywidgets=7.6.3=pyhd3deb0d_0
-  - jedi=0.17.2=py36h5fab9bb_1
+  - jedi=0.17.2=py36h9f0ad1d_1
   - jinja2=2.11.3=pyh44b312d_0
   - json5=0.9.5=pyh9f0ad1d_0
-  - jsonschema=3.2.0=py_2
+  - jsonschema=3.2.0=py36h9f0ad1d_1
   - jupyter-offlinenotebook=0.2.1=pyhd8ed1ab_0
   - jupyter-resource-usage=0.5.1=pyhd8ed1ab_0
   - jupyter_client=6.1.11=pyhd8ed1ab_1
   - jupyter_core=4.7.1=py36h5fab9bb_0
-  - jupyter_server=1.3.0=py36h5fab9bb_0
+  - jupyter_server=1.4.0=py36h5fab9bb_0
   - jupyter_telemetry=0.1.0=pyhd8ed1ab_1
-  - jupyterhub-base=1.1.0=py36h9f0ad1d_5
-  - jupyterhub-singleuser=1.1.0=py36h9f0ad1d_5
+  - jupyterhub-base=1.3.0=py36h5fab9bb_0
+  - jupyterhub-singleuser=1.3.0=py36h5fab9bb_0
   - jupyterlab=3.0.7=pyhd8ed1ab_0
-  - jupyterlab_server=2.2.0=pyhd8ed1ab_0
+  - jupyterlab_pygments=0.1.2=pyh9f0ad1d_0
+  - jupyterlab_server=2.3.0=pyhd8ed1ab_0
   - jupyterlab_widgets=1.0.0=pyhd8ed1ab_1
   - krb5=1.17.2=h926e7f8_0
   - ld_impl_linux-64=2.35.1=hea4e1c9_2
@@ -64,27 +65,29 @@ dependencies:
   - libgcc-ng=9.3.0=h2828fa1_18
   - libgomp=9.3.0=h2828fa1_18
   - libnghttp2=1.43.0=h812cca2_0
-  - libsodium=1.0.18=h36c2ea0_1
+  - libsodium=1.0.18=h516909a_1
   - libssh2=1.9.0=hab1572f_5
   - libstdcxx-ng=9.3.0=h6de172a_18
   - mako=1.1.4=pyh44b312d_0
   - markupsafe=1.1.1=py36h8f6f2f9_3
   - mistune=0.8.4=py36h8f6f2f9_1003
   - nbclassic=0.2.6=pyhd8ed1ab_0
-  - nbconvert=5.6.1=py36h9f0ad1d_1
+  - nbclient=0.5.2=pyhd8ed1ab_0
+  - nbconvert=6.0.7=py36h5fab9bb_3
   - nbformat=5.1.2=pyhd8ed1ab_1
   - ncurses=6.2=h58526e2_4
-  - notebook=6.1.6=py36h5fab9bb_0
+  - nest-asyncio=1.4.3=pyhd8ed1ab_0
+  - notebook=6.2.0=py36h5fab9bb_0
   - nteract_on_jupyter=2.1.3=py_0
   - oauthlib=3.0.1=py_0
-  - openssl=1.1.1i=h7f98852_0
+  - openssl=1.1.1j=h7f98852_0
   - packaging=20.9=pyh44b312d_0
   - pamela=1.0.0=py_0
   - pandoc=2.11.4=h7f98852_0
-  - pandocfilters=1.4.2=py_1
+  - pandocfilters=1.4.2=py36_0
   - parso=0.7.1=pyh9f0ad1d_0
-  - pexpect=4.8.0=pyh9f0ad1d_2
-  - pickleshare=0.7.5=py_1003
+  - pexpect=4.8.0=py36h9f0ad1d_1
+  - pickleshare=0.7.5=py36h9f0ad1d_1002
   - pip=21.0.1=pyhd8ed1ab_0
   - prometheus_client=0.9.0=pyhd3deb0d_0
   - prompt-toolkit=3.0.16=pyha770c72_0
@@ -98,7 +101,7 @@ dependencies:
   - pyparsing=2.4.7=pyh9f0ad1d_0
   - pyrsistent=0.17.3=py36h8f6f2f9_2
   - pysocks=1.7.1=py36h5fab9bb_3
-  - python=3.6.12=hffdb5ce_0_cpython
+  - python=3.6.13=hffdb5ce_0_cpython
   - python-dateutil=2.8.1=py_0
   - python-editor=1.0.4=py_0
   - python-json-logger=2.0.1=pyh9f0ad1d_0
@@ -117,18 +120,17 @@ dependencies:
   - sqlite=3.34.0=h74cdb3f_0
   - terminado=0.9.2=py36h5fab9bb_0
   - testpath=0.4.4=py_0
-  - tk=8.6.10=h21135ba_1
+  - tk=8.6.10=hed695b0_1
   - tornado=6.1=py36h8f6f2f9_1
   - traitlets=4.3.3=py36h9f0ad1d_1
   - typing_extensions=3.7.4.3=py_0
   - urllib3=1.26.3=pyhd8ed1ab_0
   - wcwidth=0.2.5=pyh9f0ad1d_2
   - webencodings=0.5.1=py_1
   - wheel=0.36.2=pyhd3deb0d_0
-  - widgetsnbextension=3.5.1=py36h5fab9bb_4
+  - widgetsnbextension=3.5.1=py36h9f0ad1d_4
   - xz=5.2.5=h516909a_1
   - zeromq=4.3.4=h9c3ff4c_0
   - zipp=3.4.0=py_0
   - zlib=1.2.11=h516909a_1010
 prefix: /opt/conda/envs/r2d
-

repo2docker/buildpacks/conda/environment.py-3.6.yml

@@ -1,12 +1,12 @@
 # AUTO GENERATED FROM environment.yml, DO NOT MANUALLY MODIFY
-# Generated on 2021-02-16 14:42:56 UTC
+# Generated on 2021-02-22 12:25:15 UTC
 dependencies:
 - python=3.6.*
 - ipywidgets==7.6.3
 - jupyter-offlinenotebook==0.2.1
 - jupyter-resource-usage==0.5.1
 - jupyterlab==3.0.7
-- jupyterhub-singleuser==1.1.0
-- nbconvert==5.6.1
-- notebook==6.1.6
+- jupyterhub-singleuser==1.3.0
+- nbconvert==6.0.7
+- notebook==6.2.0
 - nteract_on_jupyter==2.1.3