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  1. DataBiosphere/toil DataBiosphere/toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 882 237

  2. blog blog Public

    Repository for posts / code that don't need their own repo

    Jupyter Notebook

  3. gene-outlier-detection gene-outlier-detection Public

    A Bayesian model for identifying gene expression outliers for individual single samples (N-of-1) when compared to a cohort of background datasets.

    Python 9 3

  4. odd-pi odd-pi Public

    Library for managing Object Detection over Discord using a Raspberry Pi

    Jupyter Notebook

  5. BD2KGenomics/toil-rnaseq BD2KGenomics/toil-rnaseq Public

    UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline

    Python 38 10

  6. fastq_pair fastq_pair Public

    FASTQ pairing algorithms written in Rust

    Rust 6 1