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Popular repositories Loading

  1. PO_2_MLSA PO_2_MLSA Public

    Enables the calculation of phylogenies based on single copy core genome gene products, based on bidirectional BLAST results obtained with proteinortho

    Python 4

  2. fasta2phylip fasta2phylip Public

    simple conversion of fasta alignments to phylip

    Python 4

  3. PO_2_GENECONTENT PO_2_GENECONTENT Public

    Generate GeneContent trees based on based the presence or absence of Genes from a given bacterial pan-genome using bidirectional BLAST results obtained with proteinortho

    Python 2

  4. bin_polisher bin_polisher Public

    Purify pre-generated bins (e.g. using Maxbin) based on z-score differences in contig coverage using multiple sequencing datasets

    Python 1

  5. bac-genomics-scripts bac-genomics-scripts Public

    Forked from aleimba/bac-genomics-scripts

    Collection of scripts for bacterial genomics

    Perl

  6. prokka prokka Public

    Forked from tseemann/prokka

    Rapid prokaryotic genome annotation

    Perl