Merge pull request #2196 from Ericgig/feature.diag #18
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# The name is short because we mostly care how it appears in the pull request | |
# "checks" dialogue box - it looks like | |
# Tests / ubuntu-latest, python-3.9, defaults | |
# or similar. | |
name: Tests | |
on: | |
[push, pull_request] | |
defaults: | |
run: | |
# The slightly odd shell call is to force bash to read .bashrc, which is | |
# necessary for having conda behave sensibly. We use bash as the shell even | |
# on Windows, since we don't run anything much complicated, and it makes | |
# things much simpler. | |
shell: bash -l -e {0} | |
jobs: | |
cases: | |
name: ${{ matrix.os }}, python${{ matrix.python-version }}, ${{ matrix.case-name }} | |
runs-on: ${{ matrix.os }} | |
env: | |
MPLBACKEND: Agg # Explicitly define matplotlib backend for Windows tests | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest] | |
# Test other versions of Python in special cases to avoid exploding the | |
# matrix size; make sure to test all supported versions in some form. | |
python-version: ["3.9"] | |
case-name: [defaults] | |
numpy-requirement: [">=1.20,<1.21"] | |
coverage-requirement: ["==6.5"] | |
# Extra special cases. In these, the new variable defined should always | |
# be a truth-y value (hence 'nomkl: 1' rather than 'mkl: 0'), because | |
# the lack of a variable is _always_ false-y, and the defaults lack all | |
# the special cases. | |
include: | |
# Mac | |
# Mac has issues with MKL since september 2022. | |
- case-name: macos | |
os: macos-latest | |
python-version: "3.10" | |
condaforge: 1 | |
nomkl: 1 | |
# Scipy 1.5 | |
- case-name: old SciPy | |
os: ubuntu-latest | |
python-version: "3.8" | |
numpy-requirement: ">=1.20,<1.21" | |
scipy-requirement: ">=1.5,<1.6" | |
condaforge: 1 | |
# No MKL runs. MKL is now the default for conda installations, but | |
# not necessarily for pip. | |
- case-name: no MKL | |
os: ubuntu-latest | |
python-version: "3.9" | |
numpy-requirement: ">=1.20,<1.21" | |
nomkl: 1 | |
# Builds without Cython at runtime. This is a core feature; | |
# everything should be able to run this. | |
- case-name: no Cython | |
os: ubuntu-latest | |
python-version: "3.8" | |
nocython: 1 | |
# Python 3.10 and numpy 1.22 | |
# Use conda-forge to provide numpy 1.22 | |
- case-name: Python 3.10 | |
os: ubuntu-latest | |
python-version: "3.10" | |
condaforge: 1 | |
# Python 3.11 and latest numpy | |
# Use conda-forge to provide Python 3.11 and latest numpy | |
# Ignore deprecation of the cgi module in Python 3.11 that is | |
# still imported by Cython.Tempita. This was addressed in | |
# https://github.com/cython/cython/pull/5128 but not backported | |
# to any currently released version. | |
- case-name: Python 3.11 | |
os: ubuntu-latest | |
python-version: "3.11" | |
condaforge: 1 | |
conda-extra-pkgs: "suitesparse" # for compiling cvxopt | |
pytest-extra-options: "-W ignore::DeprecationWarning:Cython.Tempita" | |
# Windows. Once all tests pass without special options needed, this | |
# can be moved to the main os list in the test matrix. All the tests | |
# that fail currently seem to do so because mcsolve uses | |
# multiprocessing under the hood. Windows does not support fork() | |
# well, which makes transfering objects to the child processes | |
# error prone. See, e.g., https://github.com/qutip/qutip/issues/1202 | |
- case-name: Windows Latest | |
os: windows-latest | |
python-version: "3.10" | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
channels: ${{ matrix.condaforge == 1 && 'conda-forge' || 'defaults' }} | |
- name: Install QuTiP and dependencies | |
# In the run, first we handle any special cases. We do this in bash | |
# rather than in the GitHub Actions file directly, because bash gives us | |
# a proper programming language to use. | |
run: | | |
QUTIP_TARGET="tests,graphics,semidefinite,ipython" | |
if [[ -z "${{ matrix.nocython }}" ]]; then | |
QUTIP_TARGET="$QUTIP_TARGET,runtime_compilation" | |
fi | |
export CI_QUTIP_WITH_OPENMP=${{ matrix.openmp }} | |
if [[ -z "${{ matrix.nomkl }}" ]]; then | |
conda install blas=*=mkl "numpy${{ matrix.numpy-requirement }}" "scipy${{ matrix.scipy-requirement }}" | |
elif [[ "${{ matrix.os }}" =~ ^windows.*$ ]]; then | |
# Conda doesn't supply forced nomkl builds on Windows, so we rely on | |
# pip not automatically linking to MKL. | |
pip install "numpy${{ matrix.numpy-requirement }}" "scipy${{ matrix.scipy-requirement }}" | |
else | |
conda install nomkl "numpy${{ matrix.numpy-requirement }}" "scipy${{ matrix.scipy-requirement }}" | |
fi | |
if [[ -n "${{ matrix.conda-extra-pkgs }}" ]]; then | |
conda install "${{ matrix.conda-extra-pkgs }}" | |
fi | |
python -m pip install -e .[$QUTIP_TARGET] | |
python -m pip install "coverage${{ matrix.coverage-requirement }}" | |
python -m pip install pytest-cov coveralls pytest-fail-slow | |
- name: Package information | |
run: | | |
conda list | |
python -c "import qutip; qutip.about()" | |
python -c "import qutip; print(qutip.settings)" | |
- name: Environment information | |
run: | | |
uname -a | |
if [[ "ubuntu-latest" == "${{ matrix.os }}" ]]; then | |
hostnamectl | |
lscpu | |
free -h | |
fi | |
- name: Run tests | |
# If our tests are running for longer than an hour, _something_ is wrong | |
# somewhere. The GitHub default is 6 hours, which is a bit long to wait | |
# to see if something hung. | |
timeout-minutes: 60 | |
run: | | |
if [[ -n "${{ matrix.openmp }}" ]]; then | |
# Force OpenMP runs to use more threads, even if there aren't | |
# actually that many CPUs. We have to check any dispatch code is | |
# truly being executed. | |
export QUTIP_NUM_PROCESSES=2 | |
fi | |
pytest -Werror --strict-config --strict-markers --fail-slow=300 --durations=0 --durations-min=1.0 --verbosity=1 --cov=qutip --cov-report= --color=yes ${{ matrix.pytest-extra-options }} qutip/tests | |
# Above flags are: | |
# -Werror | |
# treat warnings as errors | |
# --strict-config | |
# error out if the configuration file is not parseable | |
# --strict-markers | |
# error out if a marker is used but not defined in the | |
# configuration file | |
# --timeout=300 | |
# error any individual test that goes longer than the given time | |
# --durations=0 --durations-min=1.0 | |
# at the end, show a list of all the tests that took longer than a | |
# second to run | |
# --verbosity=1 | |
# turn the verbosity up so pytest prints the names of the tests | |
# it's currently working on | |
# --cov=qutip | |
# limit coverage reporting to code that's within the qutip package | |
# --cov-report= | |
# don't print the coverage report to the terminal---it just adds | |
# cruft, and we're going to upload the .coverage file to Coveralls | |
# --color=yes | |
# force coloured output in the terminal | |
- name: Upload to Coveralls | |
env: | |
GITHUB_TOKEN: ${{ secrets.github_token }} | |
COVERALLS_FLAG_NAME: ${{ matrix.os }}-${{ matrix.python-version }}-${{ matrix.case-name }} | |
COVERALLS_PARALLEL: true | |
run: coveralls --service=github | |
towncrier-check: | |
name: Verify Towncrier entry added | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Install Towncrier | |
run: | | |
python -m pip install towncrier | |
- name: Verify Towncrier entry added | |
if: github.event_name == 'pull_request' | |
env: | |
BASE_BRANCH: ${{ github.base_ref }} | |
run: | | |
# Fetch the pull request' base branch so towncrier will be able to | |
# compare the current branch with the base branch. | |
# Source: https://github.com/actions/checkout/#fetch-all-branches. | |
git fetch --no-tags origin +refs/heads/${BASE_BRANCH}:refs/remotes/origin/${BASE_BRANCH} | |
towncrier check --compare-with origin/${BASE_BRANCH} | |
towncrier build --version "$(cat VERSION)" --draft | |
finalise: | |
name: Finalise coverage reporting | |
needs: cases | |
runs-on: ubuntu-latest | |
container: python:3-slim | |
steps: | |
- name: Finalise coverage reporting | |
env: | |
GITHUB_TOKEN: ${{ secrets.github_token }} | |
run: | | |
python -m pip install coveralls | |
coveralls --service=github --finish |