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  1. UltraQuant UltraQuant Public

    MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters

    26 3

  2. BarcodeBabel BarcodeBabel Public

    Peptide barcode libraries for electrospray mass spectometry proteomics

    Jupyter Notebook

  3. ProteomeGenerator2 ProteomeGenerator2 Public

    Precise, genome-scale, personalized, and sample-specific proteogenomic analysis

    Perl 5 3

  4. ProteoModlR ProteoModlR Public

    R Suite for Quantitative Proteomics Pathway Modeling, as published in Cifani et al BMC Bioinformatics 2017

    R 1 1

  5. P5BrainReorg P5BrainReorg Public

    Forked from soccin/P5BrainReorg

    Recurrence analysis of polyclonal somatic DNA rearrangements


  6. seqCNA_tazemetostat_resistance seqCNA_tazemetostat_resistance Public

    Forked from soccin/seqCNA

    Copy number analysis of shallow whole genome sequencing