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Forked from JialiUMassWengLab/Rhabdoid_PGBD5_MSK_paper
Scripts used in analysis "PGBD5 promotes site-specific oncogenic mutations in human tumors" as published in Henssen et al Nature Genetics 2017
Forked from elzbth/ChromoViz
visualize genomic data - explore structural variations and easily compare samples visually, as reported in Henssen et al Elife 2015
R Suite for Quantitative Proteomics Pathway Modeling, as published in Cifani et al BMC Bioinformatics 2017
R script that concatenates txt output files from XlinkX, Proteome Discoverer. Targets a specific protein of interest to arrange cross-links and removes duplicates and output resultant txt file of c…
Python code for aggregating and filtering whole-genome and mRNA sequencing data, as published in "Genetic mechanisms of primary chemotherapy resistance in pediatric acute myeloid leukemia: A report…
MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
18 contributions in the last year
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