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epithelial

model of a complex epithelial cell membrane

/buildITP - notebooks for creating each new lipid species
XXXX.ipynb - Jupyter notebook for generating a .itp file for a new lipid
XXXX.itp - Toplogy file created for the new lipid
epithelial.cat - catalogue file copntaining .itp files to be included when building the itp master file

/martini.ff - itp files from Martini
martini_v2_epithelial.itp - itp master file
martini_v2.0_lipids_all_201506.itp - Standard martini lipids

insane+SF.py - python2 application to build a complex membrane
epithelial.ipynb - Jupyter notebook for generating a complex epithelial membrane
testlipids.ipynb - Jupyter notebook containing utilities for testing lipids
epithelial.gro - complex epithelial membrane model in Gromacs format
epithelial.pdb - complex epithelial membrane modelin protein databank format

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model of a complex epithelial cell membrane

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