Skip to content

Commit

Permalink
Option to display publication links in main results table.
Browse files Browse the repository at this point in the history
  • Loading branch information
kjolley committed Jan 9, 2015
1 parent 8252edc commit 414b535
Show file tree
Hide file tree
Showing 2 changed files with 18 additions and 6 deletions.
24 changes: 18 additions & 6 deletions data_query.rst
Original file line number Diff line number Diff line change
Expand Up @@ -446,7 +446,8 @@ Click 'Set options' to remember any changes you make.

Main results table
==================
The 'main results table' tab contains options for the display of paged results following a query.
The 'main results table' tab contains options for the display of paged results
following a query.

Click the 'Main results table' header to display the tab.

Expand All @@ -458,11 +459,22 @@ The 'main results table' tab will scroll up.

This tab allows the following options to be modified:

* Hyperlink allele designations - Hyperlinks point to an information page about the particular allele definition. Depending on the locus, these may exist on a different website.
* Differentiate provisional allele designations - Allele designations can be set as confirmed or provisional, usually depending on the method of assignment. Selecting this option will display provisional designations in a different colour to confirmed designations.
* Sequence bin records - Displays a tooltip linking to the sequence tag if available.
* Sequence bin size - Displays the size of the sum of all contigs associated with each isolate record.
* Contig count - Displays the number of contigs associated with each isolate record.
* Hyperlink allele designations - Hyperlinks point to an information page about
the particular allele definition. Depending on the locus, these may exist on
a different website.
* Differentiate provisional allele designations - Allele designations can be
set as confirmed or provisional, usually depending on the method of
assignment. Selecting this option will display provisional designations in a
different colour to confirmed designations.
* Information about sequence bin records - Creates a tooltip that displays
details about sequence tags corresponding to a locus.
* Sequence bin records - Displays a tooltip linking to the sequence tag if
available.
* Sequence bin size - Displays the size of the sum of all contigs associated
with each isolate record.
* Contig count - Displays the number of contigs associated with each isolate
record.
* Publications - Displays citations with links to PubMed for each record.

.. index::
pair: options; isolate record
Expand Down
Binary file modified images/data_query/options4.png
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.

0 comments on commit 414b535

Please sign in to comment.