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SHOGUN: Accurate, scalable metagenomic quantification with shallow shotgun sequencing

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@bhillmann bhillmann released this 19 Jun 21:51
· 3 commits to master since this release
ff1aabe

Updates for this release:

  • Reworks the assign taxonomy command to use significantly less memory.
  • The memory is now not dependent on the size of the alignment file.
  • The LCA is now tree based instead of string based.
  • It is possible to now do a confidence based LCA taxonomic profile