Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add infer singleton option in workflow and add gene information in RGP output #239

Merged
merged 6 commits into from
Jun 12, 2024

Conversation

jpjarnoux
Copy link
Member

The option --infer_singleton was unavailable in the workflow commands, but only with a configuration file. It's now possible to use the option directly in a workflow command.

Also, we add the name of the start and stop gene, the coordinates and the length of the gene in the region_of_plasticity.tsv file.

@jpjarnoux jpjarnoux marked this pull request as ready for review June 12, 2024 07:23
ppanggolin/utils.py Outdated Show resolved Hide resolved
ppanggolin/workflow/all.py Show resolved Hide resolved
@jpjarnoux jpjarnoux merged commit 900f5c0 into dev Jun 12, 2024
4 checks passed
@jpjarnoux jpjarnoux deleted the forMicroScope branch June 12, 2024 12:22
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants