There sure is a bunch of ontology test data

leto · Mar 14, 2010 · 413cd71 · 413cd71
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diff --git a/t/data/component.ontology.test2 b/t/data/component.ontology.test2
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+!autogenerated-by:     DAG-Edit version 1.311
+!saved-by:             hjd
+!date:                 Thu Sep 12 11:05:43 EDT 2002
+!version: $Revision: 1.1 $
+!note:     file automatically generated by GO-Editor
+$Gene_Ontology ; GO:0003673
+ <cellular_component ; GO:0005575
+ %dibenzothiophene metabolism ; GO:0018895
+  %dibenzothiophene metabolism ; GO:0018896
+  %dibenzothiophene metabolism ; GO:0018897
+  %dibenzothiophene metabolism ; GO:0018898
diff --git a/t/data/mpath.ontology.test b/t/data/mpath.ontology.test
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+!autogenerated-by:     Pathbase version 2.0
+!saved-by:             	mgruenb
+!date:                 	Mon Oct 20 20:15:35 BST 2003
+!version: $Revision: 1.1 $
+!The Pathbase mouse pathology ontology provides a description of mutant and transgenic mouse pathology phenotypes and incorporates 425 known mouse pathologies hierarchically organised as "instances of" pathological processes.
+!Questions, comments and suggestions for amendment should be sent to the Co-ordinator, Dr. Paul Schofield, Dept. of Anatomy, University of Cambridge (PS@mole.bio.cam.ac.uk).
+!The ontology was developed by the Pathbase consortium (http://www.pathbase.net) funded under the European Commission's Fifth Framework programme, Contract number QLRI-CT-1999-00320.
+$pathology_ontology ; MPATH:0
+ %cell and tissue damage ; MPATH:1
+  %cell death ; MPATH:2
+   %apoptosis ; MPATH:3 ; synonym:programmed cell death
+   %necrosis ; MPATH:4
+    %bridging necrosis ; MPATH:5
+    %caseous necrosis ; MPATH:6
+    %coagulation necrosis ; MPATH:7
+    %fat necrosis ; MPATH:8
+    %fibrinoid necrosis ; MPATH:9
+    %gangrene ; MPATH:10 ; synonym:mortification
+    %hemorrhagic necrosis ; MPATH:11
+    %liquefactive necrosis ; MPATH:12
+    %piecemeal necrosis ; MPATH:13
+  %degenerative change ; MPATH:14
+   %general degenerative change ; MPATH:15
+    %myxoid/myxomatous degeneration ; MPATH:16 ; synonym:mucoid degeneration ; synonym:myxomatosis
+   %subcellular defect ; MPATH:17
+    %cytoskeletal defect ; MPATH:18
+    %endoplasmic reticulum defect ; MPATH:19
+    %golgi defect ; MPATH:20
+    %lysosomal defect ; MPATH:21
+    %mitochondrial defect ; MPATH:22
+    %peroxysomal defect ; MPATH:23
+    %plasma membrane defect ; MPATH:24
+    %nuclear defect ; MPATH:460
+   %tissue specific degenerative process ; MPATH:25
+    %alopecia ; MPATH:26
+    %arthrosis ; MPATH:27 ; synonym:osteoarthritis ; synonym:degenerative joint disease ; synonym:osteoarthrosis
+    %atherosclerosis ; MPATH:28 ; synonym:nodular sclerosis
+    %cataract ; MPATH:29
+     %cataract- capsular-epithelial ; MPATH:461
+     %cataract- nuclear and cortical ; MPATH:462
+     %cataract- cortical liquefactive ; MPATH:463
+     %cataract- lens extrusion ; MPATH:464
+    %cystic medial necrosis ; MPATH:30 ; synonym:erdheim disease ; synonym:mucoid medial degeneration ; synonym:media necrosis aortae idiopathica cystica ; synonym:media necrosis of the aorta
+    %emphysema ; MPATH:31
+    %glaucoma ; MPATH:32
+     %glaucoma developmental ; MPATH:465
+     %glaucoma- open angle ; MPATH:466
+     %glaucoma- angle closure ; MPATH:467
+   %dystrophy ; MPATH:554
+  %intracellular and extracellular accumulation ; MPATH:33
+   %amyloid deposition ; MPATH:34
+   %bile deposition ; MPATH:35
+   %ceroid deposition ; MPATH:37
+   %glycogen deposition ; MPATH:39
+   %hyalinosis ; MPATH:40 ; synonym:hyaline degeneration, eosinophilic cytoplasmic change
+   %lipid deposition ; MPATH:42
+   %lipofuscin deposition ; MPATH:43
+   %melanin deposition ; MPATH:44
+   %protein deposition ; MPATH:45
+    %copper deposition ; MPATH:38  % mineralisation ; MPATH:555
+    %iron deposition ; MPATH:41  % mineralisation ; MPATH:555
+   %uric acid deposition ; MPATH:46
+   %pseudocyst ; MPATH:468
+   %mucous secretions ; MPATH:547
+   %mineralisation ; MPATH:555
+    %calcium deposition ; MPATH:36
+    %copper deposition ; MPATH:38  % protein deposition ; MPATH:45
+    %iron deposition ; MPATH:41  % protein deposition ; MPATH:45
+  %intracellular and extracellular depletion ; MPATH:47
+   %decalcification ; MPATH:48
+   %demyelination ; MPATH:49
+   %glycogen depletion ; MPATH:50
+   %hypocalcification ; MPATH:51
+   %lipid depletion ; MPATH:52
+   %osteopenia ; MPATH:53
+   %osteoporosis ; MPATH:54
+ %developmental and structural abnormality ; MPATH:55
+  %general developmental defect ; MPATH:56
+   %agenesis ; MPATH:57 ; synonym:agenesia
+   %aplasia ; MPATH:58
+   %branching morphogenesis defect ; MPATH:59
+   %communication defect ; MPATH:60
+   %curvature defect ; MPATH:61
+   %cyst ; MPATH:62
+   %depletion ; MPATH:63
+   %developmental dysplasia ; MPATH:64
+    %developmental cystic dysplasia ; MPATH:473
+   %developmental hypoplasia ; MPATH:65
+   %dilatation ; MPATH:66
+    %ectasia ; MPATH:474
+     %lymphangiectasis ; MPATH:98  % cardiovascular developmental defect ; MPATH:89
+     %ductal ectasia ; MPATH:475
+     %telangiectasia ; MPATH:476
+   %displacement and deformity ; MPATH:67
+   %diverticulum ; MPATH:68
+   %fistula ; MPATH:70
+   %fusion defect ; MPATH:71
+   %growth acceleration ; MPATH:72
+   %growth arrest ; MPATH:73
+   %hamartoma ; MPATH:74