Pgap 9185 gencode 1 #56
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I have added |
Thank you very much, Heng! When do you think it will be released? |
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Just released |
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The theme of this pull request - ability to run miniprot with more genetic codes, namely, in addition to "standard" ("1" in NCBI classification of gencodes), which matches in terms of stop codons and middle-of-the-sequence as popular prokaryotic code "11", the "Mold" genetic code ("4" in NCBI classification) - a lot of prokaryotic organisms use this code.
We found that using correct code "4" for these organism set produces improvements in annotation.
Thus - the nature of the request.
Thank you for your consideration!