This is a fork of the Quartz base quality compressor. It has a more friendly command line interface, better parallelization, fewer library dependencies and supports gzip'd FASTQ and BAM input/output. This fork still requires a Quartz dictionary as input. For human, a multi-population dictionary can be downloaded from the Quartz website. It is nontrivial to build this by yourself.
This repository has been archived by the owner on Oct 12, 2018. It is now read-only.
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A fork of Quartz (QUAlity score Reduction at Terabyte scale)
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lh3/quartz
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A fork of Quartz (QUAlity score Reduction at Terabyte scale)
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