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Update README.md
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loftytopping committed Jun 6, 2018
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Expand Up @@ -43,7 +43,11 @@ PyBox has been built in the [Anaconda Python 3.6 environment](https://www.anacon

Additional dependencies are:

- [Assimulo](http://www.jmodelica.org/assimulo). This is the numerical core of PyBox. The Assimulo Ordinary Differential Equation (ODE) solver package allows us to use solvers designed for stiff systems. As found on the project website, there are multiple [methods for installation](https://jmodelica.org/assimulo/installation.html), including both package managers and compiling from source. From my own experience, it is better to build from source against your Anaconda Python environment. You will need to point to the location of the [Sundials solver suite](https://computation.llnl.gov/projects/sundials) and both BLAS and LAPACK. You can check if your Assimulo installation has worked by opening an interactive Python shell and typing:
- [Assimulo](http://www.jmodelica.org/assimulo). This is the numerical core of PyBox. The Assimulo Ordinary Differential Equation (ODE) solver package allows us to use solvers designed for stiff systems. As found on the project website, there are multiple [methods for installation](https://jmodelica.org/assimulo/installation.html), including both package managers and compiling from source. Using conda, one can try the following:

> conda install -c chria assimulo
It may be better to build from source. You will need to point to the location of the [Sundials solver suite](https://computation.llnl.gov/projects/sundials) and both BLAS and LAPACK. Whichever method you use, you can check if your Assimulo installation has worked by opening an interactive Python shell and typing:

> from assimulo.solvers import RodasODE, CVode
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