error install #26
Comments
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Hi, Normally these errors are temporals, did you try today. In other hands, yes, you can install those packages using pip. Just in case, can you try this: |
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when it shows update packages or not，I enter y，but when it Fetching packages，it often can‘t continue feaching packages ，I have tried many times，so I enter n，but when I enter n，it seems nothing install？ |
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Hi, sorry about the issues. i am trying to reproduce. Can you paste the whole output of the command I sent you? For instance this is my output: As well can you paste here the output of this command?
Mine is this: |
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command： ./bin/conda install seqcluster bcbio-nextgen -c bioconda -c conda-forge statsmodels-0.8.0-py27_0.tar.bz2 The following packages will be downloaded:
The following NEW packages will be INSTALLED: argcomplete: 1.8.2-py27_0 conda: 4.0.5-py27_0 --> 4.3.30-py27h6ae6dc7_0 Fetching packages ... $ ./bin/conda list seqcluster packages in environment at /pipe/RNA/bin/install/seqcluster_v2: |
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Hi, that seems a connectivity problem.Can you download the package that you get the error: https://conda.anaconda.org/conda-forge/linux-64/gettext-0.19.7-1.tar.bz2 For me is working. Not sure what is going on. Can I know from where are you connecting? or are you behind a proxy? Does it gives you always the same error in the same package? Sorry not to be able to help more. |
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from China,i can download gettext-0.19.7-1.tar.bz2,maybe some unknown error, |
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Sorry I was unable to help, I am currently preparing a docker instance with everything installed in case that help for you. It will be available tomorrow, I’ll chime in here.
Cheers
… On Dec 2, 2017, at 1:17 AM, wengqi123 ***@***.***> wrote:
from China,i can download gettext-0.19.7-1.tar.bz2,maybe some unknown error,
i may change other tool,but still thanks for your help.
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I created a docker image in case you use that: you can install it with docker pull lpantano/smallrna:latest
Cheers
… On Dec 13, 2017, at 8:07 AM, Lorena Pantano ***@***.***> wrote:
Sorry I was unable to help, I am currently preparing a docker instance with everything installed in case that help for you. It will be available tomorrow, I’ll chime in here.
Cheers
> On Dec 2, 2017, at 1:17 AM, wengqi123 ***@***.*** ***@***.***>> wrote:
>
> from China,i can download gettext-0.19.7-1.tar.bz2,maybe some unknown error,
> i may change other tool,but still thanks for your help.
>
> —
> You are receiving this because you commented.
> Reply to this email directly, view it on GitHub <#26 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABi_HL9KZSMDjh9cpXk5xZQfJ-7H8lFeks5s8Ot_gaJpZM4QbWLh>.
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#####command：bin/conda install seqcluster bcbio-nextgen -c bioconda
Fetching package metadata: ......
Solving package specifications: .
Error: Dependencies missing in current linux-64 channels:
Did you mean one of these?
You can search for this package on anaconda.org with
(and similarly for the other packages)
You may need to install the anaconda-client command line client with
it mean need ipdb，arrow？and i pip install them ，still can't install？
how to solve it？
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