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Preparing sourmash for CAMI 2 evaluations
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Formatting sourmash for CAMI evaluations


This repo has the snakemake pipeline for running CAMI 2 evaluations (with OPAL), including indices preparation based on the CAMI 2 databases.

The sourmash biobox definition is currently in sourmash-bio/bioboxes


The snakemake pipeline is continuously built by GitHub Actions on every change, and OPAL reports are published to github pages. Here are the links to access them:

Other similar CAMI evaluation repos

These are other tools which participated in CAMI before and made their submission process public.

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